Pairwise Alignments

Query, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

Subject, 511 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 68.6 bits (166), Expect = 6e-16
 Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 35/246 (14%)

Query: 115 IARSVEYSEDRSWVVFNLRPEARWHDGQPITSADVAFSYRTLL--KDGHPIYRTNLQEVQ 172
           +A S E  ++   + F LR   ++H+G+P  +A V F++  LL  +      R+N   ++
Sbjct: 78  LAESWEELDEGKRIRFKLRQNVKFHNGEPFNAAAVKFTFERLLGEQGAKGPQRSNYVAIE 137

Query: 173 RVDILGPLRIRFVFKRAGNPLLILRL---GEMPVLPKHYWQKRDFKATTFEPPLGSGPYR 229
            VD++    +    K A +P+L+ +L   G M V P +  +K +        P+G+G ++
Sbjct: 138 SVDVIDDYTVDMKLK-APDPVLLTKLAGYGGMIVPPAYIKEKGEDNFNL--NPVGTGAFK 194

Query: 230 ITQVQPGRRLVFERVKNYWGKDLAVNRGKYNFNRVEYEFYRDATVAFEAFKAGEFDIYIE 289
                P   +  E   +YWG       G    + +EY F  + + A    +AG  D+ I 
Sbjct: 195 FVSYAPKNNIKLEANPDYWG-------GAPKLSELEYRFIAEPSTAVAELQAGRVDLVIP 247

Query: 290 HQAKNWANGYNFPAVRRGEV------IKAQIPHSIPTQT-QGLFMNSRRAAFSDPRVRQA 342
                       P +  G +       K QI  S+P  T   L  N+R    +DP+VR+A
Sbjct: 248 ------------PTIPIGMIPVIEGDSKLQIV-SVPGPTVDALRFNTRDGITADPKVRKA 294

Query: 343 LGLMLD 348
           + + +D
Sbjct: 295 IIMAVD 300