Pairwise Alignments

Query, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

Subject, 531 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 92.8 bits (229), Expect = 3e-23
 Identities = 125/469 (26%), Positives = 187/469 (39%), Gaps = 84/469 (17%)

Query: 93  PLMVGTGQYDP--SGDEPTSSYGLIARSVEYSEDRSWVVFNLRPEARWHDGQPITSADVA 150
           P  +G+  YD   + D   S    +A+    S D    VF+L+P A++HDG+P+TSADV 
Sbjct: 59  PQFIGSKIYDGLLTYDYELSPKPSLAKEWSVSADGLEYVFHLQPNAKFHDGKPVTSADVE 118

Query: 151 FSYRTLLKDGHPIYRTNLQEVQRVDILGPLRIRF-VFKRAGNPLLILRLGEMPVLPKHYW 209
           FS    LK+ HP  R     V+ +D   PL  +  + K A   +  L   E PV+PKH +
Sbjct: 119 FSI-LRLKEAHPRGRATFANVESIDTSNPLVAKVKLSKPAPGLITALASSESPVVPKHIF 177

Query: 210 QKRDFKATTFEPP---LGSGPYRITQVQPGRRLVFERVKNYWGKDLAVNRGKYNFNRVEY 266
           +   FK T    P   +GSGP+ + +  PG  ++ E+  NYW      +  +   +RV  
Sbjct: 178 E--TFKPTDNPKPAQIIGSGPFVLKEWVPGSHILLEKNANYW------DAPRPYLDRVII 229

Query: 267 EFYRDATVAFEAFKAGEFDIYIEHQAKNWANGYNFPAVRRGEVIKAQIPHSIPT------ 320
               DA     A + GE DI           G N  A+   E +K     SIPT      
Sbjct: 230 RLINDAGARAAALETGEGDI-----------GPNPVALADLERLK-----SIPTLKVDDR 273

Query: 321 ------QTQGLFMNSRRAAFSDPRVRQALGLMLDF-EWTNRALFSSAYRRSTSYYPNSEF 373
                 Q   L +N       + +VRQA+   +D     +  L+  A    T   P    
Sbjct: 274 IYAYAGQQNQLVINLENDYLKELKVRQAIAHAIDVPALIDTVLYGYAVPSPTPISPG--- 330

Query: 374 AASGLPTGKEWLLLAPFRDQLPAKLFSEPYKVSHTDGRGISRQTLRQALGLLAEAGWKLH 433
                        LA F                H    G ++  +  A  LL EAG+   
Sbjct: 331 -------------LAKF----------------HNPDIGFAKFDVALAEKLLDEAGF--- 358

Query: 434 GQRLVDSKGQQLRMELLLVNPNLERILQPYVENLSSIGIDARLRTVDRAQY-KQRLDQFD 492
             R    K  +LR+     NP  +       + LS IGI+A ++  D   Y K       
Sbjct: 359 -PRKDGGKRFKLRVTTNPFNP--QTYSDFIAQALSKIGIEADIQKFDFGTYVKVVYTDRA 415

Query: 493 FDMILMTLNQTLSPGL-EQWLYFHSSQAATKGSKNYAGVKDPVVDHLLD 540
           +D+ + +L+ T  P    Q +Y+  +        N +   +P VD LL+
Sbjct: 416 WDLSVESLSNTFDPTAGVQRVYWSKNFKIGLPFSNASHYANPEVDRLLE 464