Pairwise Alignments

Query, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

Subject, 535 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  107 bits (268), Expect = 1e-27
 Identities = 120/463 (25%), Positives = 192/463 (41%), Gaps = 69/463 (14%)

Query: 114 LIARSVEYSEDRSWVVFNLRPEARWHDGQPITSADVAFSYRTLLKDGHPIYRTNLQEVQR 173
           L+A+S + S D     FNLRP  +WHDG+P TSADVAFS  T +K+ HP  R     +  
Sbjct: 84  LLAKSWDVSADGLRYTFNLRPGVKWHDGKPFTSADVAFSIST-IKEVHPRGRNTFLNLTA 142

Query: 174 VDILGPLRIRFVFKRAGNPLLI--LRLGEMPVLPKHYWQKRDFKATTFE-PPLGSGPYRI 230
           V+    L    V  +   P LI  L   E P++PKH ++            P+G+GP++ 
Sbjct: 143 VETPNELTAVLVLSKPA-PYLITALAAAETPIVPKHLYEGTKVTENPVNLAPIGTGPFKF 201

Query: 231 TQVQPGRRLVFERVKNYWGKDLAVNRGKYNFNRVEYEFYRDATVAFEAFKAGEFDIYIEH 290
            +   G  +VFER  +YW      +  +   +R+   F  DA+    A + GE D+    
Sbjct: 202 KEWVRGSHIVFERNADYW------DAPRPYLDRLIVRFIPDASARAIAIETGEIDL---- 251

Query: 291 QAKNWANGYNFPAVRRGEVIKAQIPHSIPTQTQG---------LFMNSRRAAFSDPRVRQ 341
            A +    Y+       ++ + +   S+   T G         +  N  +  F D RVR+
Sbjct: 252 -APSTPVAYS-------DLDRLKELPSLGFDTNGYQYTNSISRVEFNLEKDVFKDVRVRR 303

Query: 342 ALGLMLDFEWTNRALFSSAYRRSTSYYPNSEFAASGLPTGKEWLLLAPFRDQLPAKLFSE 401
           A   ++D       +F++          N  + A+         +  P   +L  K F  
Sbjct: 304 AFAHVID----RNVIFNTV---------NFGYGAT---------IAGPINPKL-TKWFVN 340

Query: 402 PYKVSHTDGRGISRQTLRQALGLLAEAGWKLHGQRLVDSKGQQLRMELLLVNPNLERILQ 461
             K    D        L+ A  LL EAG+K    R  D    +L ++ +       R   
Sbjct: 341 DLKTYPID--------LKAAEALLDEAGYK----RGADGIRFKLNLDYVPSTEAYPRGAD 388

Query: 462 PYVENLSSIGIDARLRTVDRAQYKQRL-DQFDFDMILMTLNQTLSPGL-EQWLYFHSSQA 519
              + L+ +G+D  +RT D A Y +R+    DFD     ++    P +  Q LY+  +  
Sbjct: 389 YIRQALAKVGVDVTVRTQDFATYTKRIYTDRDFDFAYEGMSNLFDPTVGVQRLYWSKNFK 448

Query: 520 ATKGSKNYAGVKDPVVDHLLDTLLAARTRDDQVAAARALDRVL 562
                 N A   +P VD LL+        D +VA  + + ++L
Sbjct: 449 KGVPFSNGAAYSNPKVDALLEAAAIEIDPDKRVAQWKEIQQIL 491