Pairwise Alignments

Query, 476 a.a., Membrane-bound lytic murein transglycosylase D from Pseudomonas putida KT2440

Subject, 471 a.a., lytic transglycosylase from Pseudomonas simiae WCS417

 Score =  640 bits (1652), Expect = 0.0
 Identities = 322/474 (67%), Positives = 382/474 (80%), Gaps = 9/474 (1%)

Query: 1   MSSRSRRTSHSVALTRLAQISALALAATLVGCQSTRQLDESDSVRAHNYQARIKHKPSPL 60
           MSS  R+++HS ALTRLAQ  A+A++ATL GCQS+    +S      N  A+IK KP   
Sbjct: 1   MSSSIRKSNHSDALTRLAQAVAVAVSATLAGCQSSNFTAQSTVQPKPNLTAKIKQKPVIW 60

Query: 61  LV-KPAEQAPQDVWERMRQGFALQDSIDVNPRIEQQRLWFASNPTFIESAGERGSLYLHY 119
           L  KPA + PQDVWERMR+GF LQD + VNPRIEQQRLWFASNP+F+E+AGERGSLY+HY
Sbjct: 61  LSDKPAPEVPQDVWERMRRGFQLQDGVGVNPRIEQQRLWFASNPSFLENAGERGSLYIHY 120

Query: 120 IVERLEERDMPLELALLPAIESAYNPMAYSRASAAGMWQFMPATGRHFNLRQTNFYDGRR 179
           IVERLEER+MPLELALLP IESAYNPMAYSR+ A G+WQF+P+TGR+FNLRQT  YDGRR
Sbjct: 121 IVERLEERNMPLELALLPVIESAYNPMAYSRSDAVGLWQFIPSTGRYFNLRQTRAYDGRR 180

Query: 180 DVTASTNAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPLP 239
           D+TAST AALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNE+LGLPTDYWNLPLP
Sbjct: 181 DITASTTAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLP 240

Query: 240 QETRDYVPKLLALSQVVSTPEAYGVNLTPIANEPYFEAVAINDRLDLSRVAAFANIDEDE 299
           QET+DYVPK LALSQVV  PEAYGVNL PIAN PYFE V +   +DLSRVAA A IDEDE
Sbjct: 241 QETKDYVPKFLALSQVVLAPEAYGVNLNPIANTPYFEVVEVKQSMDLSRVAALAEIDEDE 300

Query: 300 LIQLNPAFKKRMTVDGPKQLLVPTAKAQLLSASLSNLNPEQLVSLQPPKAAFARAVAEAK 359
           L QLNPA K+R T+DGP+ LLVP++KAQLL+++LS + PE+L++++P K  F   V  A+
Sbjct: 301 LFQLNPALKQRTTLDGPQHLLVPSSKAQLLTSTLSTMKPEELLAMRPKKQVFDE-VETAR 359

Query: 360 APVGARSYRVKRGDNLSAIAKANRVSVKDIKRWNRLSGNSLRAGQVLALRGGSAPSAAGN 419
                R+Y+V+ GDNL+ IAKAN+V V D++RWN+L+G +L+ GQ L ++          
Sbjct: 360 VAGRTRNYKVRSGDNLTLIAKANKVDVHDLQRWNKLNGQALKVGQTLVMQD------TRK 413

Query: 420 RVA-ASGKRSTQYKVRKGDSLYLVAKRFNVEMKHLKRWNPRSGHALKPGQTLTV 472
           RVA A  K+  QYKV+KGDSLY+VAKRFNVEM+HLKRWNPR+G ALKPGQ L V
Sbjct: 414 RVAKADSKKPVQYKVKKGDSLYIVAKRFNVEMQHLKRWNPRTGQALKPGQMLVV 467



 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 3/57 (5%)

Query: 354 AVAEAKAPVGARSYRVKRGDNLSAIAKANRVSVKDIKRWNRLSGNSLRAGQVLALRG 410
           A A++K PV    Y+VK+GD+L  +AK   V ++ +KRWN  +G +L+ GQ+L + G
Sbjct: 416 AKADSKKPV---QYKVKKGDSLYIVAKRFNVEMQHLKRWNPRTGQALKPGQMLVVSG 469