Pairwise Alignments

Query, 148 a.a., ribonuclease H from Pseudomonas putida KT2440

Subject, 160 a.a., Ribonuclease HI (EC 3.1.26.4) from Variovorax sp. SCN45

 Score =  194 bits (492), Expect = 7e-55
 Identities = 87/141 (61%), Positives = 109/141 (77%), Gaps = 2/141 (1%)

Query: 5   VEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMSLKRECE 64
           V ++TDGACKGNPGPGGWG  +     EK+L+GGE  TTNNRMEL A I+GL +LKR C+
Sbjct: 15  VVIYTDGACKGNPGPGGWGAWLKSGTTEKDLFGGELNTTNNRMELTAVIEGLAALKRPCK 74

Query: 65  VVLTTDSQYVMKGINEWMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNR--HKVTWKWVR 122
           V+L  DSQYV KGI EW+  WK +GW TA+K+PVKN +LWQ+LD+ V    H++ W+WV+
Sbjct: 75  VLLYLDSQYVRKGITEWIRGWKAKGWVTASKQPVKNVELWQRLDKLVTEGGHQIEWRWVK 134

Query: 123 GHIGHPGNERADQLANRGVDE 143
           GH G PGNERAD LAN+GVD+
Sbjct: 135 GHSGDPGNERADMLANKGVDK 155