Pairwise Alignments

Query, 252 a.a., DNA polymerase III subunit epsilon from Pseudomonas putida KT2440

Subject, 233 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

 Score =  178 bits (452), Expect = 8e-50
 Identities = 102/229 (44%), Positives = 135/229 (58%), Gaps = 8/229 (3%)

Query: 8   RFVILDTETTGMPVGEGHRIIEIGCVEVIGRRLTGRHFHVYLQPDRESDEGAINVHGITD 67
           R +I DTETTG     G R++EIGC+E+I R  TGR FH Y  P R+    A  VHG++ 
Sbjct: 2   REIIFDTETTGFDPASGDRLVEIGCIELINRVPTGRTFHAYYNPQRDMPSAAEAVHGLSS 61

Query: 68  AFLVGKPRFGDVAEEFFQFIQGATLVIHNAAFDVGFINNEFALLGQQDRADISQHCTILD 127
            FL  KP F +   E   F++ + LV HNA FD GF+N+E  L  +    D      ++D
Sbjct: 62  QFLSDKPLFREGVAELMDFLEDSPLVAHNARFDFGFLNHELKLCAR----DAVSMDRMID 117

Query: 128 TLLLARSRHPGQRNSLDALCKRYDIDNSGRELHGALLDSELLADVYLAMTGG-QTSLSLA 186
           T+ +AR+ HPG ++SLDALC RY ID S R  HGALLD+ELLA +Y+ +TGG Q  L LA
Sbjct: 118 TVAIARTLHPGAKHSLDALCTRYGIDRSHRVKHGALLDAELLAQLYVELTGGRQIGLGLA 177

Query: 187 GNGADTEEDGQGAGGSEIRRIVGRAPGRVIMASAEELEAHAERLAAIAK 235
               + E++      +E   +    P RV  ASAEELE HA  +A + K
Sbjct: 178 ---QEEEKEIVRVELTETAVVRPVRPARVFTASAEELERHAAFVAKLDK 223