Pairwise Alignments

Query, 252 a.a., DNA polymerase III subunit epsilon from Pseudomonas putida KT2440

Subject, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 11/166 (6%)

Query: 9   FVILDTETTGMPVGEGHRIIEIGCVEVIGRRLTGRHFHVYLQPDRESDEGAINVHGITDA 68
           + I+D ETTG   G+ HRI E+  V   G ++    F   + PD E       + GI  +
Sbjct: 3   YAIVDIETTG-GYGKRHRITEVAAVAHNGSQILDS-FQTLINPDCEIPGFITGLTGIDQS 60

Query: 69  FLVGKPRFGDVAEEFFQFIQGATLVIHNAAFDVGFINNEFALLGQQDRADISQHCTILDT 128
            + G P F D+A+E + F++    V HN  FD  FI +EF  +G+    D  + CT+   
Sbjct: 61  MVEGAPYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFERIGKS--FDRPKLCTV--- 115

Query: 129 LLLARSRHPGQRN-SLDALCKRYDIDNSGRELHGALLDSELLADVY 173
             L+R   PG R+ SL  +C+  +I+   R  H A  D+E  A+++
Sbjct: 116 -RLSRKIFPGLRSYSLGRICEHKNIEIKSR--HRAFGDAEATAELF 158