Pairwise Alignments

Query, 510 a.a., NADH:ubiquinone oxidoreductase, membrane subunit M from Pseudomonas putida KT2440

Subject, 982 a.a., Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B from Variovorax sp. SCN45

 Score =  137 bits (344), Expect = 2e-36
 Identities = 124/465 (26%), Positives = 202/465 (43%), Gaps = 32/465 (6%)

Query: 1   MILPWLILIPFIGGFLCWLGERFGATLPRWIALLTMSLLLGIGLWLWGTGDYTLAPAPGA 60
           M L +L+ +PFI   L  L           +A          GL   G    T    P  
Sbjct: 1   MPLVFLVALPFIASVLAALMPSNARNRESTLA----------GLVALGCAIQTAWLFPQI 50

Query: 61  EPAWALEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCS--WKEIQRHVGFFH 118
                L  +++W+   G+++   +DG + L  +L   +G L VL +  +      V  F 
Sbjct: 51  AHGNVLRQEIQWLPALGLNLVFRMDGFAWLFCMLVLGIGALVVLYARYYMSASDPVPRFF 110

Query: 119 LNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGHSSADGKKTRIYAATKFFI 178
              +  +G ++GV L+ +L     FWE+  +  + LI  W H   D ++    A T    
Sbjct: 111 SFFLAFMGAMMGVVLSGNLIQMVLFWELTSLFSFLLIGYW-HHRRDARRGARMALT---- 165

Query: 179 FTQASGLIML--VAILGLVLVNYNTTGVLTFNYSDLLKAELPAGIEYVLMLGFFIAFAVK 236
            T A GL +L  V +LG ++ +Y    VL     DL++A     +  VL+L   +    K
Sbjct: 166 VTGAGGLCLLAGVLVLGRIVGSYELDVVLASG--DLIRAHALYPVALVLIL---LGAFTK 220

Query: 237 LPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLG 296
               PFH WLP A A APT  S  L    +      L+    P+       F  +    G
Sbjct: 221 SAQFPFHFWLPRAMA-APTPVSAYLHSATMVKLGVFLMARLWPVLSGTEQWFWLVGGA-G 278

Query: 297 LIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAA 356
            I +  G F+A  Q D+K L+A+S++SH+G + + +   S  A   AV  ++ H    A+
Sbjct: 279 AITLLLGGFIAMFQRDLKALLAYSTISHLGLITLLLGLNSPLAAVAAVFHVMNHATFKAS 338

Query: 357 LFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGS 416
           LF+ +G +     TRD+R++ GL   +     +++  +A+  G+P    F+ + +    +
Sbjct: 339 LFMAAGIIDHETGTRDIRKLSGLMRLMPITGTLAIIASASMAGVPLLNGFLSKEMFFAET 398

Query: 417 -FVH-VPWI----TVIATTGLVFGSVYSLIMIHRAYFGPAKTDTV 455
            F+   PW+     VIAT   +F   YS   +   +FGP   D V
Sbjct: 399 VFIQATPWVDFSLPVIATIAGIFSVAYSARFVFDVFFGPPCGDEV 443