Pairwise Alignments

Query, 510 a.a., NADH:ubiquinone oxidoreductase, membrane subunit M from Pseudomonas putida KT2440

Subject, 492 a.a., NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) from Variovorax sp. SCN45

 Score =  340 bits (872), Expect = 7e-98
 Identities = 190/497 (38%), Positives = 292/497 (58%), Gaps = 25/497 (5%)

Query: 2   ILPWLILIPF-IGGFLCWLGERFGATLPRWIALL--TMSLLLGIGLWLWGTGDYTLAPAP 58
           +L   I +P   G  L   G    A   RW+AL+   +S L+ + L+             
Sbjct: 3   LLSLAIWVPIAFGAVLLAFGRDEHAKGVRWVALVGAIVSFLVTVPLF---------TRFQ 53

Query: 59  GAEPAWALEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFH 118
               A     K  WI RF ++ HL +DGLSL ++LLT  + V+ V+ +W+ I   V  + 
Sbjct: 54  NGTAAMQFVEKTSWISRFNVNYHLGVDGLSLWLVLLTSFITVIVVISAWEVITERVNQYM 113

Query: 119 LNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGHSSADGKKTRIYAATKFFI 178
              + + G ++GVF ALD  LF+ F+E  L+PMY +I +WG  +      +IYAA KFF+
Sbjct: 114 GAFLILSGFMIGVFSALDGVLFYVFFEATLIPMYLIIGIWGGPN------KIYAAFKFFL 167

Query: 179 FTQASGLIMLVAILGLVLVNYNTTGVLTFNYSDLLKAELPAGIEYVLMLGFFIAFAVKLP 238
           +T    L+MLVA++ L    YN +G  +F+     K  L +  +  L   FF AFAVK+P
Sbjct: 168 YTLLGSLLMLVALIFL----YNKSGG-SFDILAWHKLPLGSTAQTFLFFAFFAAFAVKVP 222

Query: 239 VVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLI 298
           + P H+WLPD H +APT GS  LA I+LK  AYG LRF++P+ P+AS E+A + + L LI
Sbjct: 223 MWPVHTWLPDVHVEAPTGGSAVLAAIMLKLGAYGFLRFSMPIAPDASHEWAWLMIALSLI 282

Query: 299 GIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALF 358
            + Y   +A  Q D+K+L+A+SSV+HMGFV +G +  ++  + G ++QM+AHG  + A+F
Sbjct: 283 AVIYVGLVALVQQDMKKLVAYSSVAHMGFVTLGFFIFNELGVSGGIVQMIAHGFVSGAMF 342

Query: 359 ILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFV 418
           +  G LY+R+H+R +   GG+ + +    A +L FA A+ GLPGT  FVGE+++++G+  
Sbjct: 343 LGIGVLYDRVHSRQIADYGGVVNTMPKFAAFALLFAMANCGLPGTAGFVGEWMVILGAVK 402

Query: 419 HVPWITVIATTGLVFGSVYSLIMIHRAYFGPAKTDTV--LAGMDGRELIMVLGLAVLLIL 476
              WI + A T L+FG+ Y+L M  R Y GP   D V  L  ++ RE +M+  LA+ ++ 
Sbjct: 403 ANFWIGLGAATALIFGAAYTLWMYKRVYLGPVGNDHVKELKDINAREFLMLSLLAIAVLW 462

Query: 477 LGVYPQPFLDTSAATMS 493
           +G+YP+PF D   A+++
Sbjct: 463 MGLYPKPFTDAMDASVT 479