Pairwise Alignments

Query, 593 a.a., NADH-quinone oxidoreductase subunit C/D from Pseudomonas putida KT2440

Subject, 417 a.a., NADH-quinone oxidoreductase subunit D from Rhodanobacter sp000427505 FW510-R12

 Score =  303 bits (777), Expect = 7e-87
 Identities = 161/410 (39%), Positives = 231/410 (56%), Gaps = 29/410 (7%)

Query: 212 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDY 271
           +N GP HP+AHG  R+++++DGE IV   P +G  HRG EK+AE + ++  I Y DR+DY
Sbjct: 9   MNFGPQHPAAHGVLRLIMEMDGETIVRIDPHVGLLHRGTEKLAESKPFNQSIGYMDRLDY 68

Query: 272 LGGVMNNLPYVLAVEKLAGIKVPQKVDVIRIMLAEFFRITSHLLFLGTYIQDVGAMTPVF 331
           +  + N   YV A+E L GI+ P++   IR M  E  RI +HL+++G+   D+GAM  + 
Sbjct: 69  VSMMCNEHAYVRAIETLLGIEAPERAQYIRTMFDEITRILNHLMWIGSNALDLGAMAVML 128

Query: 332 FTFTDRQRAYTVIEAITGFRLHPAWYRIGGVAHDLP--------RGWDK----------- 372
           + F +R+    V EA++G R+H  +YR GGV  DLP          W K           
Sbjct: 129 YAFREREELMDVYEAVSGARMHATYYRPGGVYRDLPAQMSQYRESPWHKGADLKRINSWR 188

Query: 373 ------LVKDFVEWLPKRLDEYTKAALQNSILKGRTIGVAAYNTKEALEWGTTGAGLRAT 426
                  +  F    P ++DEY      N I K RT+G+   + + A +WG TGA LR +
Sbjct: 189 EGSMLDFLDAFTADFPSKVDEYEVLLTTNRIWKQRTVGIGVVSPELAQQWGMTGAMLRGS 248

Query: 427 GCNFDLRKARPYSGYENFEFEVPLAHNGDAYDRCMVRVEEMRQSIRIIDQC---LRNMPE 483
           G  +DLRK +PY+ Y   +F++P+  NGD YDR +VRVEEMRQS RII QC   LR  P 
Sbjct: 249 GVEWDLRKKQPYAKYAEMDFDIPVGVNGDCYDRYLVRVEEMRQSNRIIRQCVEWLRANP- 307

Query: 484 GPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS 543
           GP    +    PP +    Q +E LI HF   + G  +PA E++  +EA KG    YL S
Sbjct: 308 GPVMVKNFKVAPPSRVEMKQDMEALIHHFKLFTEGYCVPAGETYCAVEAPKGEFGCYLVS 367

Query: 544 DGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
           DG    +R  +R P + HL  + +V+ G M+AD++A +G+ D V  +VDR
Sbjct: 368 DGANKPFRVHLRAPGFAHLSSMDTVVHGHMLADVVAMIGTYDLVFGEVDR 417