Pairwise Alignments

Query, 593 a.a., NADH-quinone oxidoreductase subunit C/D from Pseudomonas putida KT2440

Subject, 569 a.a., hydrogenase 3, large subunit from Escherichia coli BL21

 Score =  170 bits (431), Expect = 1e-46
 Identities = 155/589 (26%), Positives = 253/589 (42%), Gaps = 71/589 (12%)

Query: 17  QDVVVELNNRF-GADAFVAQETRTGMPVLWVKRAQLKEVLSFLRGVAKPYSMLYDLHGVD 75
           Q  +  LN  F G     A +T+  + V  VK   L EV+ FL    K    L  L G D
Sbjct: 8   QHYLAALNEAFPGVVLDHAWQTKDQLTVT-VKVNYLPEVVEFL--YYKQGGWLSVLFGND 64

Query: 76  ERLRTQRRGLPAADFSVFYHLLSIERNSD--VMIKVSLSEGDLNLPTVTGIWPNANWYER 133
           ER       +        Y++LS+E+ +   + ++V +       P+VT   P A W ER
Sbjct: 65  ERKLNGHYAV--------YYVLSMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWGER 116

Query: 134 EVWDMFGIDFAGHPHLSRIMMPPTW--EGHPLRKDY------PARATEFDPYSLTLAKQQ 185
           EV DM+G+   G P   R+++P  W  E +PLRKD       PA  T+ + Y       +
Sbjct: 117 EVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDAETYEFI---NE 173

Query: 186 LEEESARFNPEAWGMKRQGANEDYMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGY 245
           L ++     P                  +GP H ++       L +DGE I+D    + Y
Sbjct: 174 LGDKKNNVVP------------------IGPLHVTSDEPGHFRLFVDGENIIDADYRLFY 215

Query: 246 HHRGAEKMAERQSWHSFIPY-TDRIDYLGGVMNNLPYVLAVEKLAGIKVPQKVDVIRIML 304
            HRG EK+AE +  ++ + + +DR+  + G  ++  Y  +VE   GI+VP++  +IR +L
Sbjct: 216 VHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAIL 275

Query: 305 AEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAITGFRLHPAWYRIGGVAH 364
            E  R+ SHLL LG      G  +     F  R+ +  + E +TG R       IGG+  
Sbjct: 276 LEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRR 335

Query: 365 DLPRGWDKLVKDFVEWLPKRLDEYTKAALQNSILKGRTIGVAAYNTKEALEWGTTGAGLR 424
           DL +      +   + + + + E     L    ++ RT+G+   + + A ++   G  +R
Sbjct: 336 DLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVR 395

Query: 425 ATGCNFDLRKARPYSGYENFEFEVPLAHNGDAYDRCMVRVEEMRQSIRIIDQCLRNMPEG 484
           A+G   D R   P+ GY     EV      D   R  VR+ E+  ++ +ID  L N+P G
Sbjct: 396 ASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGG 455

Query: 485 PYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD 544
           P                           L V     +P   +    EA +G + ++  + 
Sbjct: 456 P---------------------------LMVEGFTYIPHRFALGFAEAPRGDDIHWSMTG 488

Query: 545 GGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
                YR R R  +Y +   +  +++G+ V+D    +GS+D   +  DR
Sbjct: 489 DNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537