Pairwise Alignments

Query, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  219 bits (558), Expect = 6e-62
 Identities = 120/290 (41%), Positives = 168/290 (57%), Gaps = 5/290 (1%)

Query: 3   KRLMPSTTALQCFEAAARHLSFTRAAQELHLTQSAVSKQVAQLEDMLSHSLFQRIRRRLH 62
           +R +PST AL CFEAAAR+ SFT+AAQEL LTQ AV +Q+  LE  L+  LF+R RR + 
Sbjct: 2   RRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVR 61

Query: 63  LTPAGALYLTEVNKILTQIDISSRYILSYGDE--TEVLRIATQPTFGARWLVPRLKGFGD 120
           LT AG  Y  +V     Q+D   R  LS   +    V+ +A  PTFG +WL+PRLK F  
Sbjct: 62  LTEAGLSYSRQV---AAQLDAVERDTLSVMRQQGANVIELAVVPTFGTQWLLPRLKDFQQ 118

Query: 121 RYPRIHLDVRNELEPFDLVQAKADVAFFFGQGTWPGATCIELFSEEVVPVCSPQLLASHR 180
           R+P + +++ N   PF       D A +FG   W G    +L  E  VPVCSP LL    
Sbjct: 119 RHPEVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQG 178

Query: 181 FDSAQALTEHRLLQCVSRPEAWHEWFLGLGLHSQNSYHGPRFDTFYLCIRAAISGCGIAL 240
              A+ + +  LLQ  +RP AW +WF  +G++ +    GPR++ F +  +AA+   GIAL
Sbjct: 179 MLEARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIAL 238

Query: 241 IPRYLVAEELSEGKLVVAWDHPVASNGRHFIAHAEHAAEVPKIRAFVQWI 290
           IP +L+  EL EG+LVVA  H ++S+  +++   E   E   +RAF  W+
Sbjct: 239 IPPFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWL 288