Pairwise Alignments

Query, 460 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

Subject, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

 Score =  310 bits (795), Expect = 5e-89
 Identities = 160/418 (38%), Positives = 251/418 (60%), Gaps = 7/418 (1%)

Query: 12  LQHGLTSRQVSMISIAGIIGAGLFIGSSNAIATAGPAILISYAMTGLLVLLVMRMLGEMA 71
           L+  L  R + ++++   IG GLF+GS+ AI  AGPAI++SY + GL +L++MR LGEMA
Sbjct: 18  LKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRALGEMA 77

Query: 72  IANPNSGSFSTYASEAIGPWAGFTIGWLYWWFWVLIIPVEAIAGADILHAYFPGVPSWLF 131
           + NP +GSFS YA + +GP AGF  GW YW+ W++    E  A A  +  +FP  P W++
Sbjct: 78  VHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWFPDTPRWIW 137

Query: 132 AFLIMLVLSGTNLVSVKNFGAFEYWFALVKVVAIIGF-IGVCTLAVFGFWPLAEVSGVSR 190
           A   ++ +   NL++VK FG FE+WFAL+K+V II   IG   +  FGF       G+S 
Sbjct: 138 ALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGVALGISN 197

Query: 191 LWDSGGFMPNGFGTVLGGVLITIFSFFGAEIVTIAADETANPKDKIRRATNLVVYRIAIF 250
           LW  GGFMPNG   VL  + + +F++ G E++ + A E  NP+  I  A   V +RI +F
Sbjct: 198 LWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPSAIGSVFWRILLF 257

Query: 251 YLASIFLVVSLVAWNDPGLKAVGSFQRVLEVLNVPGAKLLVDLVVLVAVTSCMNSGLYTA 310
           Y+ ++F+++S+  WN+ G +    F    E L +  A  +++ VV+ A  S  N G+++ 
Sbjct: 258 YVGALFVILSIYPWNEIGTQG-SPFVMTFERLGIKTAAGIINFVVITAALSSCNGGIFST 316

Query: 311 SRMLYSLGARGQALSVTKRISGSGVPTVAVIFSTLAGFAGCFVNYVFPGKVFGFLLSTTG 370
            RMLYSL   GQA +   + S +GVP  A++ S  A   G  +NY+ P KVF ++ S   
Sbjct: 317 GRMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVLLNYLVPEKVFVWVTSIAT 376

Query: 371 AIALLVYLVIAVSQLRMR---ARAEREGRPLELKMWLFPWLTWLVIGTIVMVLGYMLF 425
             A+  +L+I ++QL+ R   + AE+ G  L+ +MWL+P  ++L +  +++V+G M +
Sbjct: 377 FGAIWTWLMILLAQLKFRKSLSPAEQAG--LKYRMWLYPVSSYLALAFLLLVVGLMAY 432