Pairwise Alignments

Query, 607 a.a., UvrABC system protein C from Pseudomonas putida KT2440

Subject, 610 a.a., excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) from Escherichia coli BW25113

 Score =  626 bits (1614), Expect = 0.0
 Identities = 324/610 (53%), Positives = 434/610 (71%), Gaps = 8/610 (1%)

Query: 1   MSQVFDASAFLATCSGRPGVYRMFDGEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALV 60
           MS  FDA AFL T + +PGVYRM+D    ++YVGKAK+LKKRL+SYFR    + KT ALV
Sbjct: 1   MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV 60

Query: 61  ARIAQVETTITANETEALLLEQNLIKEWRPPYNILLRDDKSYPYVFLSDGEFPRLGIHRG 120
           A+I Q++ T+T  ETEALLLE N IK ++P YN+LLRDDKSYP++FLS    PRL +HRG
Sbjct: 61  AQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG 120

Query: 121 AKKAKGRYFGPYPSAGAIRESLSLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKGPCTD 180
           AK AKG YFGP+P+  A+RE+L+LLQK F +RQCE+S Y NR+RPCLQYQI RC GPC +
Sbjct: 121 AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVE 180

Query: 181 -LVTAEEYAEDVRHSVMFLEGRSQQLGNELNAEMEKAAMALDFEKAAELRDQIALLRRVQ 239
            LV+ EEYA+ V +  +FL G+  Q+  +L + ME A+  L+FE+AA +RDQI  +RRV 
Sbjct: 181 GLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVT 240

Query: 240 DQQYIEGGSGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVAEVMAAFL 299
           ++Q++     D+DVI    + G ACVH++ +R G+VLGS+++FP+V    E++EV+  F+
Sbjct: 241 EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFV 300

Query: 300 SQYYL-GNAERELPGELIVNVVHEDFNAITEALHTLRGRELTISHRVRGTRARWQQLAVT 358
            Q+YL G+  R LPGE++++    D   + ++L  L GR++ +  + RG RAR+ +LA T
Sbjct: 301 GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLART 360

Query: 359 NAEQALNARLANRQHMAARFEALAEVLGLDEVPQRLECYDISHSSGEATVASCVVFGPEG 418
           NA  AL ++L+ +  +  R  ALA VL L EV +R+EC+DISH+ GE TVASCVVF   G
Sbjct: 361 NAATALTSKLSQQSTVHQRLTALASVLKLPEV-KRMECFDISHTMGEQTVASCVVFDANG 419

Query: 419 PIKSDYRRFNIEDVTAGDDYAAMHQALTRRYGRIKDGEGKLPDVLLVDGGKGQLNMARDV 478
           P++++YRR+NI  +T GDDYAAM+Q L RRYG+  D + K+PDV+L+DGGKGQL  A++V
Sbjct: 420 PLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAID-DSKIPDVILIDGGKGQLAQAKNV 478

Query: 479 MQELGFT----DLTLLGVAKGVTRKAGFETLYLNDVHHEFTLKGDSSALHLIQQIRDEAH 534
             EL  +       LLGVAKG  RKAG ETL+       F+L  DS ALH+IQ IRDE+H
Sbjct: 479 FAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESH 538

Query: 535 RFAITGHRARRGKARRVSSLEDVAGVGPKRRRDLLKHFGGLQELNRASIDEIAKAPGISK 594
             AI GHR +R K +  SSLE + GVGPKRR+ LLK+ GGLQ L  AS++EIAK PGIS+
Sbjct: 539 DHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQ 598

Query: 595 KLAESIYASL 604
            LAE I+ SL
Sbjct: 599 GLAEKIFWSL 608