Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 511 a.a., transposase from Pseudomonas simiae WCS417

 Score =  283 bits (725), Expect = 8e-81
 Identities = 169/474 (35%), Positives = 259/474 (54%), Gaps = 12/474 (2%)

Query: 36  LKEQVKLLRDRLFNRKSEQTVESNTPQLALFNEPESQWVPTADDADEEVVAPS--KQRGK 93
           L  ++ +L+   F ++SEQ        L    + +   +    +A     AP+  +Q+ K
Sbjct: 46  LAHEIAILKRHKFAKRSEQLSPDQGSLLDDLLDADIAAIEAELNAVNPRPAPTEPRQKPK 105

Query: 94  RKPLSADLPRIEVIHDLPEHELTCACGCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGC 153
           R PL    PR  + H+ PE+   C CGC+   +GE  SE+LD  P    V +HVR  + C
Sbjct: 106 RAPLPPKFPRTVIRHE-PENT-QCTCGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWAC 163

Query: 154 RGCESAPVTADKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTL 213
           R CE+  + A  PAQ+I+K + +  +LA ++  K+ D LPL+R E +  R G+ I R TL
Sbjct: 164 RQCETL-IQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLMIARSTL 222

Query: 214 ARWVIQCSEHFQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQASGPPD 273
           A+WV Q     QPL++ +R+ +L   VIH DET VQ+L  P    T ++++W  ++ P  
Sbjct: 223 AQWVGQTGVQLQPLVDALREAVLAESVIHADETPVQMLA-PGEKKTHRAYVWAYSTTPFS 281

Query: 274 R-QVVLFDYTTSRAQEVPLRLLEGYRGYVMTDDYAGYNALALQPGVERLACMAHVRRKFV 332
               V++D++ SRA E     L  + G ++ DD+AGY A   + G+  + CMAH RRKF 
Sbjct: 282 ALNAVVYDFSPSRAGEHARNFLGAWNGKLVCDDFAGYKA-GFEKGMTEIGCMAHARRKFF 340

Query: 333 EAQKVQPKGKTGRADVALTMINKLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDK 392
           +   +    K+  A+ AL  I  LY +ER  +D SDE R+  RQE++ PI+  L  W+  
Sbjct: 341 D---LHVANKSQLAEQALHSIGGLYEVERQTRDMSDEDRWRIRQEKAAPIIATLHDWMLA 397

Query: 393 THSQVTPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDT 452
               V   S   KA+ Y    W  L RY++ G +PIDNN  E  I+P+ +GR  WLF+ +
Sbjct: 398 QRDLVPNGSATAKALDYSLKRWVALTRYLDDGAVPIDNNPVENQIRPWALGRSNWLFAGS 457

Query: 453 PKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPHASSVADYEALLPWNCSP 506
            +    +A I SL+++A++NG +PY +L+ VL RLP A   ++   LLP    P
Sbjct: 458 LRSGKRAAAIMSLIQSARLNGHDPYAYLKDVLTRLP-AQRASEIGQLLPHQWRP 510