Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 524 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  312 bits (800), Expect = 2e-89
 Identities = 202/526 (38%), Positives = 293/526 (55%), Gaps = 31/526 (5%)

Query: 1   MISVPDNLPDDPAALKLLLAQLL--AERTVDKGQIVDLK-----EQVKLLRDRLFNRKSE 53
           M+ +P    ++ AAL+  LA+    +E  V + ++V  +     E+++ L+ +LF  KSE
Sbjct: 1   MVQMPT--AEEFAALQQALAEATRRSESLVGELRVVTTERDLALERLRALQGQLFAAKSE 58

Query: 54  QTVESNTPQLALF-NE-----PESQWVPTADDADEEVVAPSKQRGKR--KPLSADLPRIE 105
                 + Q  LF NE     P +Q +P   D +E       QR KR  KPL   LPR  
Sbjct: 59  AR---GSEQKDLFLNEAEALAPTAQTLPAESDDEESTTVAGHQRKKRGRKPLDPALPRDI 115

Query: 106 VIHDLPEHELTCACGCRKHV-VGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCESAPVTAD 164
           V H+LPE E  CA      V +G + SEQ+ ++P Q+RVL+H R  Y C  C+ +   A 
Sbjct: 116 VRHELPESERVCAHDGHALVEIGAEVSEQMHVIPEQVRVLQHHRIKYACPCCDLSLKVAP 175

Query: 165 KPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHF 224
            PA++I + + +    A ++T KY  G+PL+R   +L R G  I   TLA  V++     
Sbjct: 176 TPARIIPRGLLTEEAQAWVITGKYQFGMPLYRTAVLLRRFGGNIVSNTLAAGVVRIGLAV 235

Query: 225 QPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQ--ASGPPDRQVVLFDYT 282
           QP++NL+RD LL+S +I+ DET VQVLKEP R   ++S+MW Q   SGPP R   LF Y 
Sbjct: 236 QPVINLLRDHLLDSDLIYGDETTVQVLKEPGRKAQTKSYMWAQMNGSGPPVR---LFAYA 292

Query: 283 TSRAQEVPLRLLEGYR--GYVMTDDYAGYNALALQPGVERLACMAHVRRKFVEAQKVQPK 340
             R      +L  G R     ++D Y  Y+ +A   G+  L C  H RR FV+A++  PK
Sbjct: 293 PGRGAMHADKLYAGIRRGATFVSDGYQVYDGIAAGHGLTHLGCWVHARRPFVKAEEAIPK 352

Query: 341 GKTGRADVA---LTMINKLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTHSQV 397
                  +A   + +I KLY  E   +  + ++R   R+  S  ++  ++  L      V
Sbjct: 353 AARSPDQLATRFIKLIGKLYRAEARAEKWTPQRRGRLRKRYSASVVSNIEQLLLTNLHAV 412

Query: 398 TPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPKGAT 457
            P S+LG+A+ YL   W +L R++E+G  P+D+N  E AI+PFV+GRK WLF+DT  GA 
Sbjct: 413 APTSLLGEALHYLHGQWPKLIRFLESGSWPLDSNPVENAIRPFVVGRKGWLFADTVGGAN 472

Query: 458 ASAQIYSLVETAKVNGQEPYTWLRHVLERLPHASSVADYEALLPWN 503
           ASA +YSL+ETAK NG EPY +L  + ++LP A +  DYEALLPWN
Sbjct: 473 ASANLYSLIETAKANGIEPYRYLVALFKKLPLAQTADDYEALLPWN 518