Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 634 a.a., Transposase from Sphingobium sp. HT1-2

 Score =  222 bits (565), Expect = 4e-62
 Identities = 165/529 (31%), Positives = 248/529 (46%), Gaps = 63/529 (11%)

Query: 8   LPDDPAALKLLL--------------AQLLAERTVDKGQIVDLKEQVKLLRDRLFNRKSE 53
           LPDD  AL+ LL              A  +A  +  +  I  LK Q+  LR   +   +E
Sbjct: 11  LPDDVEALRALLSAALERADDAEARLANAMARESATEAMIAHLKLQIAKLRREQYGASAE 70

Query: 54  QTVESNTPQLALFNEPESQWVPTADDADEE-------------VVAPSKQRGKRKPLSAD 100
           ++         L ++ E Q      DA E+             V A +++R  RKP    
Sbjct: 71  RSRR-------LLDQLELQLEDLEADACEDDLAAEVAAARTADVAAFARKRPSRKPFPEH 123

Query: 101 LPRIEVIHDLPEHELTCAC----GCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGC 156
           LPR  V+   P     C+C    G R   +GE  +E L+++P Q +V++ VR+ + CR C
Sbjct: 124 LPRERVVIPAP-----CSCPACGGARLSKLGEDVTETLEVIPRQWKVIQTVREKFSCRDC 178

Query: 157 ESAPVTADKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARW 216
           E A      P  ++ +  A PS LAMLL  KY    PL+R      R G+ +   TLA  
Sbjct: 179 E-AITQPPAPFHVVPRGWAGPSFLAMLLFEKYGQHQPLNRQAERFAREGVPLSTSTLADQ 237

Query: 217 VIQCSEHFQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQASGP---PD 273
           V   S    PL   +   +L +  +H D+T V VL     D T++ W++V+   P    D
Sbjct: 238 VGAASFALMPLYLRIEAHVLAARRLHGDDTTVPVLATGKTD-TARLWVYVRDDRPFAGSD 296

Query: 274 RQVVLFDYTTSRAQEVPLRLLEGYRGYVMTDDYAGYNAL---ALQPG-VERLACMAHVRR 329
               LF Y+  R  E P   L  + G +  D Y GYN L     QP  V    C AH RR
Sbjct: 297 PPAALFHYSRDRRGEHPRAHLASWAGILQADAYGGYNELYAPGRQPAPVIEAGCFAHARR 356

Query: 330 KFVEAQKVQPKGK-------TGR----ADVALTMINKLYGIERDLKDASDEQRFIGRQER 378
           KF E   V+   +       TG     A  A+  ++ L+ IER +   + E+R   RQ+ 
Sbjct: 357 KFFELADVEAAARRKSRGQRTGMIYPIALEAVQRLDALFEIERGINGKAAEERVAVRQDF 416

Query: 379 SLPILEQLKSWLDKTHSQVTPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIK 438
           S P++  L +WL    ++++    L KA+ Y+   W+   R++  G + + NN AERA++
Sbjct: 417 SAPLMTDLHAWLTAQLAKLSRSHDLAKAINYMLRRWDAFTRFLGDGRICLTNNAAERALR 476

Query: 439 PFVIGRKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERL 487
              +GRKAWLF  + +G   +A +YSL++TA++N  +P  WL  VL R+
Sbjct: 477 CVPLGRKAWLFCGSDRGGQRAAVLYSLIQTARLNDVDPQAWLADVLARI 525