Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 537 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  248 bits (632), Expect = 5e-70
 Identities = 173/517 (33%), Positives = 256/517 (49%), Gaps = 38/517 (7%)

Query: 6   DNLPDDPAALKLLLAQLLAERTVDKGQIVDLKEQVKLLRDRLFNRKSEQTVESNTPQLAL 65
           D LPD+   LK   A +LAER     +   L+  +KL+    F ++SE+       QLAL
Sbjct: 18  DELPDNVEQLK---AMVLAERA----RAARLEHILKLINRSTFGKRSEKLP---VDQLAL 67

Query: 66  FNEPESQWVPTADDADEEV--------VAPSKQRG---KRKPLSADLPRIEVIHDLPEHE 114
             E ++  +  AD   ++         + P ++R    +R  L A LPR E +  +    
Sbjct: 68  TLEDQNVALGEADGLQDKAAEEAGRYGLRPRRRRAPDAERASLPAHLPRFETV--IEPKN 125

Query: 115 LTCACGCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCESAPVTADKPAQLIEKSM 174
           L CACG   H +GE  SE+LDI+P Q RV+  +R  Y CR C      A  PA ++   +
Sbjct: 126 LECACGGTLHKIGEDRSERLDIIPAQHRVMVTIRPRYACRCCSDGVRQASAPAHVVPGGL 185

Query: 175 ASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQPLLNLMRDR 234
            + +++A +L  KY D LPL+R   +  R GIEI R T+A WV +      P+ + MR  
Sbjct: 186 PTEALIADVLINKYCDHLPLYRQSKIFARQGIEISRATMANWVGRGIAALMPITDRMRAD 245

Query: 235 LLESPVIHCDETRVQVLKEPDRDPTSQSWMWV-----QASGPPDRQVVLFDYTTSRAQEV 289
            L    +  DET V+VL  P    T   +MWV     +A G  D  + L+ Y   R +  
Sbjct: 246 ALARARLFVDETTVKVLA-PGTGKTKTGYMWVIVCDDRAHGGVDPPLALYTYMPGRGKMW 304

Query: 290 PLRLLEGYRGYVMTDDYAGYNALA----LQPGVERLACMAHVRRKFVEAQKVQPKGKTGR 345
             +LL  Y+G +  D +  Y+          GV +  C AH+RR FV+A    P      
Sbjct: 305 AKQLLGSYQGILQVDAWQAYDQFGKDDGADTGVTKSYCWAHLRRGFVDAGSDAPV----- 359

Query: 346 ADVALTMINKLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTHSQVTPQSVLGK 405
           A  AL  I ++YGIE++++  + E+R   RQER+ P++E+L +W   T  ++   S    
Sbjct: 360 AQDALQRIAEIYGIEKEIRGRTAEERLAVRQERTRPLVEKLHAWFAATAPRMMAGSATSD 419

Query: 406 AVLYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPKGATASAQIYSL 465
           A+ Y    W    R+++ G + IDNN AERAI+P  + RK  LF+    GA   A I SL
Sbjct: 420 AMKYALKRWAGFTRFLDDGRIEIDNNTAERAIRPVTLQRKNALFTGHQLGAENWAAISSL 479

Query: 466 VETAKVNGQEPYTWLRHVLERLPHASSVADYEALLPW 502
           VET K+    PY +L  VL R+   +     + LLP+
Sbjct: 480 VETCKMLDINPYAYLCDVLTRIITRADTDPIDDLLPY 516