Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 536 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  238 bits (607), Expect = 4e-67
 Identities = 174/543 (32%), Positives = 268/543 (49%), Gaps = 46/543 (8%)

Query: 1   MISVPDNLPDDPAALKLLLAQLLAER-----TVDKGQIV--DLKEQVKLLRDRLFNRKSE 53
           M+S   NLP+DPA LK ++A L AE      TV    +V   L+ ++  L+ + F + SE
Sbjct: 1   MLSAAQNLPEDPALLKAIIADLQAENAKLAATVRAHDLVVQALRLRIAKLKKQAFGKSSE 60

Query: 54  QTVESNTPQLALFNEP----ESQWVPTADDADEEV----VAPSKQRGKRKPLSADLPRIE 105
           + +E    QL L  E      +Q V    D +E+     V  ++   +R  +++D PR  
Sbjct: 61  K-IEREIEQLELALEDILVAAAQTVALPSDVEEDEATAHVDSARAMARRPRVASDTPRER 119

Query: 106 VIHDLPEHELTCACGCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCESAPVTADK 165
              +L        CG    +VGE  SE ++++  +++V++  R    CR CE   V    
Sbjct: 120 --KELDPGSACPDCGGELRLVGEDVSEIIEMITAKLKVIEVARPKKSCRCCEKM-VQVPA 176

Query: 166 PAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQ 225
           P++ I  SMA  S+LA +L +K+ D LPL+R   +L R G +IPR TLA W  +     Q
Sbjct: 177 PSRPIPGSMAGSSLLAYVLVSKFDDHLPLYRQNEILTRMGADIPRSTLADWCGKAMRTLQ 236

Query: 226 PLLNLMRDRLLESPVIHCDETRVQVLKEPDRDP-------TSQSWMWV------QASGPP 272
           PL+  +   +L S VIH D+T +QVL    R           + W +V        + PP
Sbjct: 237 PLIERIEASVLASIVIHADDTPIQVLDHTRRAKGLGKGVKQGRIWGYVCDQRPWNGAAPP 296

Query: 273 DRQVVLFDYTTSRAQEVPLRLLEGYRGYVMTDDYAGYNALALQPGVE------RLACMAH 326
               V++ +  +   E     L    G +  D Y GY  L  +PG +        AC AH
Sbjct: 297 G---VVYRFAPNWKAEHVQNHLCNASGILQADAYKGYAKL-YEPGADGEPRFLEAACFAH 352

Query: 327 VRRKFVEAQKVQPKGKTGRADVALTMINKLYGIERDLKDASDEQRFIGRQERSLPILEQL 386
            RR F +  K     K+  A  AL  I +LY IER++     + R   RQE S P LE L
Sbjct: 353 WRRDFHDIWKAN---KSPIAREALDRIGQLYDIEREIAGKPADVRRAVRQEHSKPKLEAL 409

Query: 387 KSWLDKTHSQVTPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIGRKA 446
           ++W ++  +++  +  L  A+ Y    W+    ++E G + IDNN AERA++P  +GR+ 
Sbjct: 410 RAWAEQQLTRIPVKGDLASAIRYGLGRWHAFSLFIEDGRVAIDNNAAERAVRPIGLGRRN 469

Query: 447 WLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPHASSVADYEALLPWNCSP 506
           WLF+ +  GA   A+  +L+E+AK+NG +P  +L  VL R+ H   +   + LLPW   P
Sbjct: 470 WLFAGSEAGAETLARAMTLIESAKMNGLDPQAYLADVLGRI-HDHKINRIDELLPWKWKP 528

Query: 507 EMP 509
            +P
Sbjct: 529 LVP 531