Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 511 a.a., transposase from Pseudomonas putida KT2440

 Score =  284 bits (726), Expect = 6e-81
 Identities = 177/509 (34%), Positives = 271/509 (53%), Gaps = 34/509 (6%)

Query: 12  PAALKLLLAQLLA--------ERTVDKGQIV--DLKEQVKLLRDRLFNRKSEQTVESN-- 59
           P  L+ L AQ L          R +   +I+    K ++ LL+   F ++SEQ   +   
Sbjct: 12  PEQLRALAAQALQLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQISPAQGS 71

Query: 60  ------TPQLALFNEPESQWVPTADDADEEVVAPSKQRGKRKPLSADLPRIEVIHDLPEH 113
                    L        Q +P +  A+       +Q  KR PL    PR  + H+ PE+
Sbjct: 72  LLDDLLDTDLEAIEAELKQLLPASSQAEP------RQSPKRAPLPPQFPRAVIRHE-PEN 124

Query: 114 ELTCACGCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCESAPVTADKPAQLIEKS 173
              CACGC+   +GE  SE+LD  P    V +HVR  + CR CE+  + A  PAQ+I+K 
Sbjct: 125 T-QCACGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETL-IQAPVPAQVIDKG 182

Query: 174 MASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQPLLNLMRD 233
           + +  +LA ++  K+ D LPL+R E +L R G+ I R TLA+WV Q     QPL++ +R+
Sbjct: 183 IPTAGLLAHVMVAKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPLVDALRE 242

Query: 234 RLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQASGPPDR-QVVLFDYTTSRAQEVPLR 292
            +L+  VIH DET VQ+L  P    T ++++W  ++ P      V++D++ SRA E    
Sbjct: 243 AVLKQGVIHADETPVQMLA-PGEKKTHRAYVWAYSTTPFSALNAVVYDFSPSRAGEHARN 301

Query: 293 LLEGYRGYVMTDDYAGYNALALQPGVERLACMAHVRRKFVEAQKVQPKGKTGRADVALTM 352
            L  + G ++ DD+AGY A   + G+  + CMAH RRKF +   +    K+  A+ AL  
Sbjct: 302 FLGDWSGKLVCDDFAGYKA-GFEQGITEIGCMAHARRKFFD---LHVANKSQLAEQALHS 357

Query: 353 INKLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTHSQVTPQSVLGKAVLYLAN 412
           I+ LY +ER  ++ SDE R+  RQE ++PI + L  W+      V   S   KA+ Y   
Sbjct: 358 ISGLYEVERQAREMSDEDRWRIRQELAVPISKTLHEWMLAQRDLVPNGSATAKALDYSLK 417

Query: 413 NWNRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVETAKVN 472
            W  L RY++ G +PIDNN  E  I+P+ +GR  WLF+ + +    +A I SL+++A++N
Sbjct: 418 RWVALTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMN 477

Query: 473 GQEPYTWLRHVLERLPHASSVADYEALLP 501
           G +PY +L+ VL RLP     ++   LLP
Sbjct: 478 GHDPYAYLKDVLTRLP-TQRASEIGQLLP 505