Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 511 a.a., transposase from Pseudomonas putida KT2440

 Score =  285 bits (729), Expect = 3e-81
 Identities = 173/487 (35%), Positives = 261/487 (53%), Gaps = 24/487 (4%)

Query: 29  DKGQIVDLKEQVKLLRDRLFNRKSEQTVESN--------TPQLALFNEPESQWVPTADDA 80
           D+  I   K ++ LL+   F ++SEQ   +            L        Q +P +  A
Sbjct: 39  DEILIEQFKFEIALLKRHKFAKRSEQISPAQGSLLDDLLDTDLEAIEAELKQLLPASSQA 98

Query: 81  DEEVVAPSKQRGKRKPLSADLPRIEVIHDLPEHELTCACGCRKHVVGEQTSEQLDIVPMQ 140
           +       +Q  KR PL    PR  + H+ PE+   CACGC+   +GE  SE+LD  P  
Sbjct: 99  EP------RQSPKRAPLPPQFPRTVIRHE-PENT-QCACGCQLQRIGEDVSEKLDYTPGV 150

Query: 141 IRVLKHVRKIYGCRGCESAPVTADKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETV 200
             V  HVR  + CR CE+  + A  PAQ+I+K + +  +LA ++  K+ D LPL+R E +
Sbjct: 151 FTVEHHVRGKWACRQCETL-IQAPVPAQVIDKGVPTAGLLAHVMVAKFADHLPLYRQEKI 209

Query: 201 LNRHGIEIPRQTLARWVIQCSEHFQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTS 260
             R G+ I R TLA+WV Q     QPL++ +R+ +L   VIH DET VQ+L  P    T 
Sbjct: 210 FGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAVLNQGVIHADETPVQMLA-PGEKKTH 268

Query: 261 QSWMWVQASGPPDR-QVVLFDYTTSRAQEVPLRLLEGYRGYVMTDDYAGYNALALQPGVE 319
           ++++W  ++ P      V++D++ SRA E     L  + G ++ DD+AGY A   + G+ 
Sbjct: 269 RAYVWAYSTTPFSALNAVVYDFSPSRAGEHARNFLGDWNGKLVCDDFAGYKA-GFEQGIT 327

Query: 320 RLACMAHVRRKFVEAQKVQPKGKTGRADVALTMINKLYGIERDLKDASDEQRFIGRQERS 379
            + CMAH RRKF +   +    K+  A+ AL  I+ LY +ER  +D SDE R+  RQE +
Sbjct: 328 EIGCMAHARRKFFD---LHVANKSQLAEQALHSISGLYEVERQARDMSDEDRWRIRQEMA 384

Query: 380 LPILEQLKSWLDKTHSQVTPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIKP 439
           +PIL+ L  W+      V   S   KA+ Y    W  L RY++ G +PIDNN  E  I+P
Sbjct: 385 VPILKTLHDWMLAQRDLVPNGSATAKALDYSLKRWVALTRYLDDGAVPIDNNQVENQIRP 444

Query: 440 FVIGRKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPHASSVADYEAL 499
           + +GR  WLF+ + +    +A I SL+++A++NG +PY +L+ VL RLP     ++   L
Sbjct: 445 WALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPYAYLKDVLTRLP-TQRASEIGQL 503

Query: 500 LPWNCSP 506
           LP    P
Sbjct: 504 LPHQWVP 510