Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 511 a.a., transposase from Pseudomonas putida KT2440

 Score =  289 bits (740), Expect = 1e-82
 Identities = 179/508 (35%), Positives = 274/508 (53%), Gaps = 22/508 (4%)

Query: 12  PAALKLLLAQLLA--------ERTVDKGQIV--DLKEQVKLLRDRLFNRKSEQT--VESN 59
           P  L+ L AQ L          R +   +I+    K ++ LL+   F ++SEQ    +SN
Sbjct: 12  PEQLRALAAQALQLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQISPAQSN 71

Query: 60  TPQLALFNEPESQWVPTADDADEEVVAPSKQRGKRKPLSADLPRIEVIHDLPEHELTCAC 119
                L  + E+          +   A  +Q  KR PL    PR  + H+ PE+   C C
Sbjct: 72  LLDDLLDTDLEAIEAELKQLLPDAPQAEPRQSPKRAPLPPQFPRTVIRHE-PENT-QCVC 129

Query: 120 GCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCESAPVTADKPAQLIEKSMASPSV 179
           GC+   +GE  SE+LD  P    V +HVR  + CR CE+  + A  PAQ+I+K + +  +
Sbjct: 130 GCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETL-IQAPVPAQVIDKGIPTTGL 188

Query: 180 LAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQPLLNLMRDRLLESP 239
           LA ++  K+ D LPL+R E +  R G+ I R TLA+WV Q     QPL++ +R+ +L   
Sbjct: 189 LAHVMVAKFADHLPLYRQEKIFGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAVLNQG 248

Query: 240 VIHCDETRVQVLKEPDRDPTSQSWMWVQASGP-PDRQVVLFDYTTSRAQEVPLRLLEGYR 298
           VIH DET VQ+L  P    T ++++W  ++ P    + V++D++ SRA E     L  + 
Sbjct: 249 VIHADETPVQMLA-PGEKKTHRAYVWAYSTTPFSGLKAVVYDFSPSRAGEHARNFLGDWN 307

Query: 299 GYVMTDDYAGYNALALQPGVERLACMAHVRRKFVEAQKVQPKGKTGRADVALTMINKLYG 358
           G ++ DD+AGY A   + G+  + CMAH RRKF +   +    K+  A+ AL  I+ LY 
Sbjct: 308 GKLVCDDFAGYKA-GFEQGITEIGCMAHARRKFFD---LHVANKSQLAEQALHSISGLYE 363

Query: 359 IERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTHSQVTPQSVLGKAVLYLANNWNRLE 418
           +ER  +D SDE+R+  RQE ++PIL++L  W+      V   S   KA+ Y    W  L 
Sbjct: 364 VERQARDMSDEERWRIRQELAVPILKKLHDWMLAQRDLVPNGSATAKALDYSLKRWVALT 423

Query: 419 RYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYT 478
           RY++ G +PIDNN  E  I+P+ +GR  WLF+ + +    +A I SL+++A++NG +PY 
Sbjct: 424 RYLDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPYA 483

Query: 479 WLRHVLERLPHASSVADYEALLPWNCSP 506
           +L+ VL RLP     ++   LLP    P
Sbjct: 484 YLKDVLTRLP-TQRASEIGQLLPHQWVP 510