Pairwise Alignments

Query, 1530 a.a., putative RHS family protein from Pseudomonas putida KT2440

Subject, 1485 a.a., T6SS PAAR-repeat protein / RhaS protein from Variovorax sp. SCN45

 Score =  583 bits (1504), Expect = e-170
 Identities = 454/1416 (32%), Positives = 639/1416 (45%), Gaps = 182/1416 (12%)

Query: 152  SMAMAAVPYLVPFVGL-GMAIRDIFNPPVTTPANPGSEPAEGDKISCSRHPPLPDTFIAQ 210
            S+A A VP  +   G+      D+F       A   S     D +SC +  P     +A+
Sbjct: 80   SIADALVPETLTVTGMITSGSSDVFIDSKAIGAARASPEMPMDTVSCKKDSP--QILLAE 137

Query: 211  GSDKVFINGQPAARSGDKTTCDATIDVNENVSPNVRIGGGTATVRDIRNGKSKIAMFTGI 270
            G++ VF+N   A+R  D T C A +      SP V IGG TA VR++ +    I+     
Sbjct: 138  GAETVFVNMGVASRKDDHTECGAKVSEG---SPTVFIGGPTARVREVADEVPLISKVLVT 194

Query: 271  IAGMLISRRFGR----------------IKGC------------TLGNPVAVATGSKLQE 302
            I  +++  R  R                I+G             + GNPV  ATG K   
Sbjct: 195  IFNLVMIYRGLRCLPKLARQGKNALPCLIEGAVGLGMGIHGLVSSFGNPVHAATGGKFLG 254

Query: 303  GPEDIDFNLPGLLAIQWARRYDSRDMRSDGLLGMGWSVPYEVELARVPHPQGGTLWIYID 362
            G  ++DF LPG L I W R Y S D+R DG LG GWS+PY +EL      +   +   ID
Sbjct: 255  GESELDFTLPGPLPIAWQRFYSSHDLRRDGALGQGWSLPYAMELRLGSDEESQPIVTLID 314

Query: 363  NDGNRLELGRLSAGDAFISAVDGLAFFQLEDGQTVVEDINEGLYRVF---DTDPLNPKRS 419
                 + L  +  G    S  DGL   + E G   +  +  GL+ +F        + +  
Sbjct: 315  EQRRPMVLPGIEPGTRQYSLRDGLDLCRTEGGHYFIH-VPGGLFFMFAPPAEGEAHAQTL 373

Query: 420  RLIRLGDRNLNCLDLLYDEQGRLKALYDKYGQTVVQLHYAARHPQRVSEVSRVFLKNGGT 479
            +L R+ DRN N +DL +D  GRL  L D  G+ ++ L YA       S   R      G 
Sbjct: 374  KLARIEDRNGNFIDLRHDALGRLAELTDSTGR-LLALDYAGE-----SRQLRAVRLAAGA 427

Query: 480  PTVERSELLVSYRYTDNGQLHEVLDATDQRVRRFTYTPEGYLNSHQLASGAVREYEWARF 539
            P  E   +LV+YR+   G+L +V D      RRF Y  +G +N H  A+G    YEW   
Sbjct: 428  PG-ELPGVLVAYRHDSEGRLLDVTDRNGAVARRFGYDAQGLMNFHADAAGLECRYEWQGT 486

Query: 540  AIPETRPTPKRLDGTPYRLPPLLEPQPDHEWRVIRHWGSDGEEYRF-------EYNLEAG 592
            A                            +  V RHW +DGE Y         +  L  G
Sbjct: 487  A---------------------------GDAHVARHWTNDGESYTVRRMPPAADDALALG 519

Query: 593  ETLVTDNLGRRDHYYWGPLYEVYKHIDPQGNCWLAEV-IAGQLIKRIDPQGGEWRYSYDD 651
            +TLV D LGR   ++W    +V  + D  G  W AE     QL+   +P G   R +YD 
Sbjct: 520  QTLVVDQLGREFAWHWNADLQVTDYADAAGRQWHAEYNELRQLVAITEPGGATTRCTYDP 579

Query: 652  IGRLIETRDPLGRSEHIKYLRHWALPIQVTDTAGRTRQYGYDSHGNLLWQQDPLGRETQY 711
            +G +    D LGR++   +   +  P + T   G T  Y Y   GNL+ + DPLGR T+Y
Sbjct: 580  MGFMSSRTDALGRTQSTGW-TEFGEPWRETLADGSTWTYAYSDQGNLVRETDPLGRTTEY 638

Query: 712  QYDPEGRVTQVTDALEKSKYLSWNTCGQLLSYRDCSNAQTLYHYDAHGRLRESINARGEH 771
             YD  G    VTD    +  ++WN C QL+S  DCS   T Y YD    L+   +A G+ 
Sbjct: 639  AYDRRGLPIVVTDGKGGTNRMAWNECAQLVSLTDCSGKTTRYTYDGWCHLQTVTDAAGQR 698

Query: 772  THFRYDARGYLVESERPDGRIDRYEIDVAGQLTRYIDPAQKTLQFRYDPSGRLVERTDAM 831
            T   +DA G L+    PD     +  D AG++    D   ++ QF +   G+ + R DA 
Sbjct: 699  TRLTHDAMGRLLSVSLPDQSHQSFRRDAAGRIVAATDALSRSTQFAFGLRGQPLTRQDAE 758

Query: 832  GYSVKFRYDAYGRLLQLTNENDESYRFGWDELDRLVAQKDLDGSGRLYAYNVLDEVIRLT 891
            G  + + YD+  RL  L NEN   + F  D  DR+V ++ + G+     Y+     + +T
Sbjct: 759  GRRIAWHYDSAQRLQSLVNENGLHFEFIRDTADRVVEERRVGGTRVQVEYDANGWPVCIT 818

Query: 892  HVPS-PDEQPPLSDNA--PPTRTTAIRHDFERDAIGRLVSKRTEDGTTDYRYDAADNL-- 946
            HVP   DE   L D     P  +  +R +  RDA+GRLV+KRT      Y YD  D L  
Sbjct: 819  HVPGIGDEDLALHDGTGPRPAASRPLRTELLRDAVGRLVAKRTGSHHYRYTYDLLDRLTE 878

Query: 947  ---LSITFTDNKGEKQQLD---YTYDANGQLLSE------TNSAGLLQYRYDELGNLQTL 994
               L       + E + L    + YD  G+L+ E      T     L++ +DELGN    
Sbjct: 879  AVKLEAPRPGTRDEPRALHRTVFAYDKLGRLIEETAIDETTGETHTLRHAHDELGNRTQT 938

Query: 995  VLPD-------QRELNHLYYGSGHLHQINLN---------GRVISDFERDAVHDEVLRTQ 1038
            VLP        QR LN+LYYGSGHLHQ+NL+          ++ISD ERD +H EV R+Q
Sbjct: 939  VLPAIASQPGVQRALNYLYYGSGHLHQVNLSHQHGNAPEVHQLISDIERDDLHREVARSQ 998

Query: 1039 GKLVTRTRYDTSGRLAGKAIHYRDAPAEVLPLLDKAYRYDASDNLIAEVLTQ--TQRRGM 1096
            G L TR   D  GR                    +A  +  +  L     TQ  + R+ +
Sbjct: 999  GALHTRFVLDPLGR--------------------RAASWCRAGGLDTAFTTQDPSWRQAI 1038

Query: 1097 SNAANDENANLEQIIGRFLDLPHTGKTYSGHNRYGYDLN--EQLQTVHQSRPNWQATQVE 1154
             +A       L+ ++  +   P      S H+  G   +  +    + Q+     A   E
Sbjct: 1039 DSAGTPGARLLDGLMKEYSYDPVGELRQSRHSLQGTTAHRFDATGRIEQTVRGAAAANSE 1098

Query: 1155 DFKYDKAGNLFDGPK-LNGLIKHNRVLVYQDKRYRYDRFGRLCEKRIGSNWVQYFEYDAE 1213
             F YD AGNL D      G ++ N V V++DKRY YD  GRL  KR G +  Q FE+D E
Sbjct: 1099 RFAYDPAGNLLDASSTAPGHVRDNLVRVFEDKRYSYDGHGRLVRKRAGRHTDQRFEWDEE 1158

Query: 1214 QRLVCVEQYR-----SGERERVVFAYDPLGRRISKEVYQRDYPEPRRRVLFHWQGFRLLQ 1268
             RLV V   R         +   F YD +GRR++K        +      F W+G RL++
Sbjct: 1159 SRLVAVHTTRRPGTPEATTQLTRFDYDAMGRRVAKH-------DAFGSTRFIWEGMRLIE 1211

Query: 1269 EVQSGLASLYVYATVESYDPLARVDGK------PGSEAIHYFHTTLVGQPEQLTDSDGNT 1322
            E +      YVY     +  +AR+D K        +  + +FH    G PE+L++++G  
Sbjct: 1212 ERRGSQVVSYVYEP-GGHVLMARLDAKAEPAEASATAQVFHFHNDTAGLPEELSNTEGQL 1270

Query: 1323 IWRSDHHGWGKIINE-WH-SQQNGR------------EQNLRNQGQYIDRETGLHFNIFR 1368
             WR+ +  WG  + E W  +  NGR            EQNLR QGQY+DR+TGLH+N FR
Sbjct: 1271 CWRASYRTWGATVTEQWEVTALNGRAVASTDTVPQAIEQNLRFQGQYLDRDTGLHYNTFR 1330

Query: 1369 FYDPDIGRFTTTDPLGIEGGVNLYSYAPNIVNYSDPLGL--CPENVKEYDITPYRPSNSP 1426
            FYDPDIGRF   DP+G+ GG NL+ YAPN   + DPLGL  C          P RP    
Sbjct: 1331 FYDPDIGRFIGPDPIGLMGGSNLHQYAPNPSRWIDPLGLSYCAFGNASKPRAP-RPGKDI 1389

Query: 1427 LENHHGILDIWAAQNVPSYGGKYPKGSPTIVLSSKN 1462
              +  G++   A       G ++P+G+ T V  +K+
Sbjct: 1390 AVDADGMVKSQA-------GKQFPEGASTTVDPTKS 1418