Pairwise Alignments

Query, 291 a.a., putative type 4/6 secretion system from Pseudomonas putida KT2440

Subject, 429 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  123 bits (308), Expect = 8e-33
 Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 1/224 (0%)

Query: 47  KPEPAYQGYPADPEFQLRGGCANLMLDAAAPLFGLVMRLRTLDELPNIKDVHQQVRIQID 106
           + EPA    PA P    +    N +  AA PL  L+ RLR     P    +  Q+   + 
Sbjct: 24  RAEPAPLAMPAAPMLTGKSQGLNPLESAAGPLLALLTRLRNTIAHPAPASLRAQLLAYLR 83

Query: 107 SIREEIRQHGYEPAQLLAYSYGLCLYIDEAVMERPWGKSSCWSHEPLLSIFHDETWGGEK 166
              E     G    ++L   Y LC  +DEAV+  PWG +S W  + LL   H+E WGGEK
Sbjct: 84  QFEERAEAAGIARNEVLLARYALCTALDEAVLSTPWGSTSDWGKQSLLITVHNEAWGGEK 143

Query: 167 IFTVITRLMQEPKRYQDVLEFMYFALCLGLKGKYALAPKGEETLNALIHQLHGIIRELRG 226
           +F ++   +Q P+    +LE +Y  +CLG +G+Y +   G   L  L  +    IR  RG
Sbjct: 144 VFQLLDHCLQSPRERLYLLELLYLCMCLGFEGRYRVMNDGRSQLETLRERTAAAIRSARG 203

Query: 227 PTPEEVCDPYTNVAPRNFRMSRIWPWWSPLVIS-AIAMAVAYGI 269
               E+   +  V     R+++  P W  + I  A+ +A+ +G+
Sbjct: 204 EHERELSPHWRGVTVARDRLAQFMPPWIAVAIGVALLLALLFGL 247