Pairwise Alignments

Query, 291 a.a., putative type 4/6 secretion system from Pseudomonas putida KT2440

Subject, 286 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  114 bits (285), Expect = 3e-30
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 1/200 (0%)

Query: 69  NLMLDAAAPLFGLVMRLRTLDELPNIKDVHQQVRIQIDSIREEIRQHGYEPAQLLAYSYG 128
           N++L AA  L   V +L+      +++ ++ Q+   I +        G E +Q+++  Y 
Sbjct: 60  NMLLAAAWELLSQVAQLKASPARESLQALNDQLSSAISAFEAHALHLGAETSQVMSARYV 119

Query: 129 LCLYIDEAVMERPWGKSSCWSHEPLLSIFHDETWGGEKIFTVITRLMQEPKRYQDVLEFM 188
           LC  IDEAV+  PWG  S WS   LLS FH+ET+GGEK F ++ RL ++P ++  +LE M
Sbjct: 120 LCSVIDEAVVTTPWGSCSDWSKRSLLSRFHNETFGGEKFFQLLERLSRDPVKHIAMLELM 179

Query: 189 YFALCLGLKGKYALAPKGEETLNALIHQLHGIIRELRGPTPEEVCDPYTNVAPRNFRMSR 248
           Y  L LG +GKY +  +G   L A+   ++  IR +RG        P    APR  R+  
Sbjct: 180 YLCLALGFEGKYRVMERGRGQLEAVQDAVYRQIRHVRGDRVPLSISPERGKAPRG-RIRI 238

Query: 249 IWPWWSPLVISAIAMAVAYG 268
           +   W+ + + A  + +  G
Sbjct: 239 VSAMWAAVGVLACLLVMYSG 258