Pairwise Alignments

Query, 291 a.a., putative type 4/6 secretion system from Pseudomonas putida KT2440

Subject, 501 a.a., OmpA-like porin from Agrobacterium fabrum C58

 Score = 91.3 bits (225), Expect = 4e-23
 Identities = 54/225 (24%), Positives = 102/225 (45%)

Query: 61  FQLRGGCANLMLDAAAPLFGLVMRLRTLDELPNIKDVHQQVRIQIDSIREEIRQHGYEPA 120
           F   G     ++ +AAPL  L   LR  D  P+   + +     I     ++      P 
Sbjct: 65  FHFGGEEVPTLVQSAAPLLNLAHLLRFSDAEPDPDQLRRACVEAITRYERDLASARISPE 124

Query: 121 QLLAYSYGLCLYIDEAVMERPWGKSSCWSHEPLLSIFHDETWGGEKIFTVITRLMQEPKR 180
           +  A  Y +C  +D+ V+ +PWG  + W+   L+S FH++  GG+++F ++    Q P  
Sbjct: 125 RARAAHYVVCATVDDVVLSKPWGVRAGWARSGLVSTFHNDVTGGDRVFDILDHFHQSPGA 184

Query: 181 YQDVLEFMYFALCLGLKGKYALAPKGEETLNALIHQLHGIIRELRGPTPEEVCDPYTNVA 240
            +D+L  +Y  L L  +G+  ++ KG   L+ +   L+  +    G    E+   +  V 
Sbjct: 185 NKDLLLLIYLCLSLAFEGRTRVSSKGALELSRIRDSLYKTLIGQYGTFERELSPHWKGVD 244

Query: 241 PRNFRMSRIWPWWSPLVISAIAMAVAYGIYSYRLHLITTEVLESL 285
            R+  +  +   W+ L + A+A A+ Y  ++  L+  +    E L
Sbjct: 245 ARHTPLRTMTALWTLLSLMALAFALGYLFFTLSLNNASDVTFERL 289