Pairwise Alignments

Query, 445 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 444 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score =  363 bits (931), Expect = e-105
 Identities = 196/445 (44%), Positives = 263/445 (59%), Gaps = 2/445 (0%)

Query: 1   MSSRNPVLWPEGLFVKPQHFQQAARASEAALHQRLGSLNAAFYGFSELQLSTEYLSLGKV 60
           MS  N V+W EG+F+  QHFQQ  R  E  +  R   L+A  +GFSEL +    L+ GK+
Sbjct: 1   MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGSWGFSELLIDQGLLAQGKL 60

Query: 61  AITKARGIMPDGTVFDIPADLPPPPPLEIEDDGSKDSEIFLCLPLRTEGGREVSWPDNAA 120
           AI  ARG++PDGT F+IP D   P PL I DD  +D  ++L LPL+  G R+      A 
Sbjct: 61  AIVSARGLLPDGTPFNIPQDDLAPSPLNI-DDNLRDGLVYLALPLKRAGARDTVDEGEAL 119

Query: 121 NF-RYNAQAEEIKDTHSADGDLVQVDLAVPNLQLKRKADDSSAYTRLAVARILERRPDGS 179
              RY +Q  E++D ++   +   V +    L+L    D  S Y  + + RI E+R D +
Sbjct: 120 EAARYVSQVREVRDDNAPFENRAPVAVGARALRLLTAQDGISDYAAIGLVRIKEKRADRA 179

Query: 180 LQLDETFYPTSVSVRAVPALQRFLEEITNTLRERARNLAARIGASGQSGIADIRDFNLLQ 239
           L LD+T+ P  + V A   L  F  E+   L +R   LA R+ ASG  G ++I DF LLQ
Sbjct: 180 LVLDDTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQ 239

Query: 240 AMNRWWPCFNHLARQGQTHPEQLYLSMSQACGEFVTFTDENRLPQEYPAYHHTALRTSFK 299
            +NR  P   HL++    HPE+ +  +    GEF TF+   R PQEYP Y H  L  SF 
Sbjct: 240 LVNRAQPLIQHLSQLSPLHPERFFSELVSLAGEFSTFSTSGRRPQEYPQYQHDDLALSFA 299

Query: 300 PLEDTLRRALSTVLQPRAVSLPLETLDFGVMTTTLEDRRLIDEADFIIAVRADLPPQTLR 359
           P+   LR ALS ++  +A  +P+    +GV    L D+ L+D A FI+ VRAD+P +TLR
Sbjct: 300 PVMAALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLLDSASFILVVRADVPGETLR 359

Query: 360 QMFIQKAKVTSLESLNDLVPLQLPGIPLLPLPVAPRDLPFHAGFSYFELDRRDPAWACMK 419
             F Q++KV S+E + DLV LQLPGI LLPLPVAPR LP+HAG +Y+ELDR   AW  + 
Sbjct: 360 ARFGQQSKVGSVEHIRDLVNLQLPGITLLPLPVAPRQLPYHAGSTYYELDRGSEAWQQLG 419

Query: 420 TANGFGFHVAGEFPGLELQFWAIRG 444
            + GF FH+AG+FPGL L FWAIRG
Sbjct: 420 NSGGFAFHIAGQFPGLNLAFWAIRG 444