Pairwise Alignments

Query, 445 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 442 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score =  250 bits (638), Expect = 7e-71
 Identities = 152/439 (34%), Positives = 236/439 (53%), Gaps = 5/439 (1%)

Query: 7   VLWPEGLFVKPQHFQQAARASEAALHQRLGSLNAAFYGFSELQLSTEYLSLGKVAITKAR 66
           V+W EG+ ++PQH Q   R     L+ R   L++  +GF  L L  +YL+LGKV + +A 
Sbjct: 6   VIWQEGMLLRPQHLQHNDRYYHRQLN-RTRLLSSDAWGFLTLDLDLQYLNLGKVVVNQAS 64

Query: 67  GIMPDGTVFDIPADLPPPPPLEIEDDGSKDSEIFLCLPLRTEGGREVSWPDNAANF-RYN 125
           G++PDG++F++   + P   L++  +  + + ++L LPL TE   EV   + +    RY 
Sbjct: 65  GVLPDGSLFELSGAMEPLV-LQVPANAGRQA-VYLALPLATENQVEVRRKEQSDVLARYV 122

Query: 126 AQAEEIKDTHSADGDLVQVDLAVPNLQLKRKADDSSA-YTRLAVARILERRPDGSLQLDE 184
           A   EI D+++      Q++ A P+L+L      S A Y +L VA++ +   +  + LD 
Sbjct: 123 ACETEIGDSNAGADSRCQINCARPDLRLMLGEGPSDAFYVKLQVAQVQDSTREDGVSLDA 182

Query: 185 TFYPTSVSVRAVPALQRFLEEITNTLRERARNLAARIGASGQSGIADIRDFNLLQAMNRW 244
            F PT + ++    +   ++E+ + L  R   +AARI  SG S  A + DF +LQ +NR 
Sbjct: 183 DFVPTFIYLQGTGYVSSCIKEVISLLATRGDAIAARIQGSGASTGAQVGDFLMLQLINRA 242

Query: 245 WPCFNHLARQGQTHPEQLYLSMSQACGEFVTFTDENRLPQEYPAYHHTALRTSFKPLEDT 304
                H   Q Q  PE+LY  +    GE  TF ++N+  Q    Y H     SF+ L + 
Sbjct: 243 ELILRHYLVQAQVRPERLYRELLSILGELSTFANDNKRAQLAVHYRHGDQGASFRGLMEG 302

Query: 305 LRRALSTVLQPRAVSLPLETLDFGVMTTTLEDRRLIDEADFIIAVRADLPPQTLRQMFIQ 364
           LR  LS+VL+  A+ L L+   +GV+   + D +L+  A FI+A  A    + LR     
Sbjct: 303 LRTVLSSVLEQHAIELVLQQRQYGVLVCPVSDLKLLGTATFILAATAQCDSEELRHRLPA 362

Query: 365 KAKVTSLESLNDLVPLQLPGIPLLPLPVAPRDLPFHAGFSYFELDRRDPAWACMKTANGF 424
             K+  +E + +LV L L GI + PLPVAPR +P+HA  +YF L+      A ++ + GF
Sbjct: 363 HLKIGPVERIRELVNLHLAGIKVQPLPVAPRQIPYHAAKTYFMLELSPRDIAQLEQSGGF 422

Query: 425 GFHVAGEFPGLELQFWAIR 443
            FH +GEF  LEL FWAIR
Sbjct: 423 AFHASGEFAELELNFWAIR 441