Pairwise Alignments

Query, 588 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 604 a.a., type VI secretion system baseplate subunit TssF from Erwinia tracheiphila SCR3

 Score =  502 bits (1293), Expect = e-146
 Identities = 265/604 (43%), Positives = 362/604 (59%), Gaps = 16/604 (2%)

Query: 1   MSLKDRFSEELRYLHELGNDFAKDNPQLARLLGKAGSDPDVERLMEAFAFLTAKLRLKLE 60
           M+L+  F++E+ YL +L    AK+ P LA  L + GSDPDVERL+E  AFL   LR K++
Sbjct: 1   MALEKYFTDEMDYLRQLARVVAKEKPYLAAFLSEKGSDPDVERLLEGMAFLAGNLREKID 60

Query: 61  DDLPELTHPMLQILWPNYLRPLPSATIIRFSPRKQSLSQSQHIPKGARLFSKPV------ 114
           D+ PELTH +L +LWPNYLRP+PS  +I ++P+K S+S +  + +G RL S+PV      
Sbjct: 61  DEFPELTHGLLNMLWPNYLRPVPSMALIEYTPQKDSISAATRVTRGTRLLSQPVYTHSHD 120

Query: 115 ---------DAVPCEFRTCTGVSLHPFEISAVSATQTLDSSVVRIGLQTLVERPLNTLGC 165
                        C F     + L P  + A++ T + + +++ +      E  LN L  
Sbjct: 121 EPQQRSSSSGGFHCTFTQSRDLWLLPLTLDAITVTNSNEMAIMDMVFSASEENSLNALAL 180

Query: 166 ARLDFHLSGDNRTALTLYLWISQYLKHVSVIMNGEVRRLPANSIGFPGFSPEEALLPYPQ 225
            +L F L      +  LY W S YL+   ++++  V  L        GF  E+ALLP+P+
Sbjct: 181 DKLRFGLGESGYNSFQLYFWFSYYLQKAELVVDNSVIELADFDFVPSGFEREDALLPHPK 240

Query: 226 NVFDGYRILQEYFVFPKRFHFFSITGLEKLWPAQACPQVGIEFHFTRQLPDTLRVGTEDF 285
           N   GYRILQEYF FP+ F FF + G+ +        Q  +  +F R LP  ++V  E  
Sbjct: 241 NAAMGYRILQEYFCFPENFLFFDVKGIPRFADDIRADQFSLRLYFNRPLPPEVKVRCETI 300

Query: 286 SLFCTPAVNLFKHSAEPIDLASEAAQVELKPRSEAQSAYEIFSVDEVIS-TRTTTDGSTG 344
            L C PAVNLF H +E I L    AQ  L+        Y+IFSVD+V S  +   + S  
Sbjct: 301 RLHCVPAVNLFSHHSESILLDGTQAQYPLQVSHLDPDLYDIFSVDKVQSWLKNDKNQSIH 360

Query: 345 EHLRTFRPFESFAHEIEHVQGRTALYYRCQLEASLRGDGVTHRIAFVRADANSYIGELET 404
             LR + PFESF H++E+ +GRT LYYR +   SL   G+ H I+FVR D    +   ET
Sbjct: 361 GVLREYAPFESFHHQMEYARGRTKLYYRIRSRQSLFRAGLEHHISFVRGDETQCVLRDET 420

Query: 405 ASIDLTCTNRDLPLALGVDDINVLTEVTPPLATYTNICAPTRPYRPVLDGQLQWALISNM 464
            S+ LTCTNR +P++L V DI + T+  P  AT+ NI  PT P  PVLDG L W+LISNM
Sbjct: 421 VSVSLTCTNRKVPISLRVADITIQTDDHPSFATFRNITRPTAPLYPVLDGSLHWSLISNM 480

Query: 465 SLNYLSLLSVEPLKAVIRTYDFAALHDIQQARTTGKRLDGIRELHTQPMDWLIKGQPIRG 524
           SLNYLSLL  + L  ++R+YD  A++D Q AR + KRLDGI  + T+P+D L +G P+RG
Sbjct: 481 SLNYLSLLDRDALCQILRSYDLPAMNDRQAARASQKRLDGILRIETKPVDRLFRGVPVRG 540

Query: 525 LHTQLKLDQAAFLCEGDLYLFGCVLAHFFALYASINSFHQLEVINTTNNEHYTWPIQTGK 584
           L T L L+Q+AF CEG+LYLFG +LA FF+LYAS+N+FH L VIN +N E Y WP+QTG+
Sbjct: 541 LATTLWLEQSAFSCEGELYLFGSILARFFSLYASVNAFHLLTVINASNKECYQWPVQTGQ 600

Query: 585 QPLI 588
            PLI
Sbjct: 601 HPLI 604