Pairwise Alignments

Query, 588 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 625 a.a., type VI secretion system baseplate subunit TssF from Erwinia tracheiphila SCR3

 Score =  218 bits (554), Expect = 8e-61
 Identities = 183/630 (29%), Positives = 291/630 (46%), Gaps = 53/630 (8%)

Query: 3   LKDRFSEELRYLHELGNDFAKDNPQLARLLGKAG---SDPDVERLMEAFAFLTAKLRLKL 59
           L D ++ EL YL E+G +FA   P++A  LG  G   +DP VERLME FAFLT++++LK+
Sbjct: 5   LLDYYNRELAYLREMGAEFAARYPKVAGRLGMRGIDVADPYVERLMEGFAFLTSRVQLKM 64

Query: 60  EDDLPELTHPMLQILWPNYLRPLPSATIIRFSP--RKQSLSQSQHIPKGARLFSKPV--D 115
           + + P  +  +L+++ PNYL P PS  I    P  +K  ++    +P+G  + S+ +   
Sbjct: 65  DAEFPRFSQRLLEMIAPNYLAPTPSLAIAELHPDSKKGDITGGFLVPRGTMMDSQTLKKS 124

Query: 116 AVPCEFRTCTGVSLHPFEISAV--------------SATQTLDSSVVRIGLQTLVERPLN 161
            V C + T   V L P  IS V                +Q    S +RI L+   +  L 
Sbjct: 125 GVTCSYTTAHDVMLQPLRISHVELGGVPADIPLGPLGLSQRGAVSALRIRLECFNDVVLK 184

Query: 162 TLGCARLDFHLSGDNRTALTLYLWISQYLKH---VSVIMNGEVRRLPANSIGFPGFSPEE 218
            L   +L F LSG +     L   I Q+       +V    + R L  +++   GF+ ++
Sbjct: 185 HLSLDQLIFFLSGPDIQDQKLLELIMQHTVGSFCQTVEAQPQRRVLHDDAVKQEGFAADQ 244

Query: 219 ALLPYPQNVFDGYRILQEYFVFPKRFHFFSITGLEKLWPAQACPQVGIEFHFTRQLPDTL 278
           A+LP     FDGYR+LQEYF FP RF F SI+    L    A  + G+       L D  
Sbjct: 245 AMLPDDLRNFDGYRLLQEYFAFPARFQFISISQPGGL---VASCKPGVNAFEIVLLLDKA 301

Query: 279 RVGTE------DFSLFCTPAVNLFKHSAEPIDLASEAAQVELKPRSEAQSAYEIFSVDEV 332
               E        +L CTP +NLF  +AE   ++    +  L   +     YEIFSV ++
Sbjct: 302 DASLERVIDKSHLALHCTPVINLFPKTAERQKISDSVHEYHLVVDNIRPLDYEIFSVQKL 361

Query: 333 ISTRTTTDGSTGEHLRTFRPFESFAHEIEHVQGRTALYYRCQLEASLRGDGVTHRIAFVR 392
            ++     G  G+  + FRPF S     E   G      R Q   S        R  ++ 
Sbjct: 362 YAS-----GGKGQGEQVFRPFWSTFSGDEGDYGAYFSLRREQRTLSEHAQRFGTRTGYIG 416

Query: 393 ADA---------NSYIGELETASIDLTCTNRDLP-LALGVDDINVLTEVTPPLATYTNIC 442
           ++          + +  +L   + ++ CT+RDLP L L  D  N + + + P+A  T   
Sbjct: 417 SEVFLSLVDERHSPWHNDLRHLTAEVMCTSRDLPLLLLQQDQGNFMMQDSIPVAQLTLRK 476

Query: 443 APTRPYRPVLDGQLQWALISNMSLNYLSLLSVEPLKAVIRTYDFAALHDIQQARTTGKRL 502
            PT P   + +G   W L+S++ +NYLSL+  +  +          L+         +++
Sbjct: 477 GPTPPCTALAEGLTAWRLVSHLQMNYLSLMDGDDGQGASALRQLLGLYANLADAPVARQI 536

Query: 503 DGIRELHTQPMDWLI-KGQPI---RGLHTQLKLDQAAFLCEGDLYLFGCVLAHFFALYAS 558
           DGIR    +P+   + +  PI   RG+  +L +D+ AF      +L G VL   F+   +
Sbjct: 537 DGIRHCQLRPVCRRVPEPGPIVFARGIGIELNVDEEAF-SGASPWLLGSVLERVFSRLVA 595

Query: 559 INSFHQLEVINTTNNEHYTWPIQTGKQPLI 588
           +N+F ++ + +    E   WP + GK+ LI
Sbjct: 596 MNTFTEMTLTSQQRGEVGYWPARMGKRALI 625