Pairwise Alignments

Query, 167 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 167 a.a., type VI secretion system contractile sheath small subunit from Dickeya dianthicola ME23

 Score =  176 bits (447), Expect = 1e-49
 Identities = 94/166 (56%), Positives = 121/166 (72%), Gaps = 3/166 (1%)

Query: 1   MTKRSD--SVAPKERINIKYVPATGDEQAEVELPHKMMVLGDF-GLDDSRSLEDRQVMRI 57
           M K +D  SVAPKERINIKYVPATG +QAE+ELP  +MV+G+  G  +   +E+RQ + I
Sbjct: 1   MAKGTDGASVAPKERINIKYVPATGGQQAEIELPLTLMVVGNMKGRTEETPIEERQTVSI 60

Query: 58  DKHTFNNVLNDADVSLAMSVPSALDATPNAELAVNLQFKSIQDFGPDRIARQVPELNKLL 117
           DK+ F +V+ +A++ L  SVP+ L+     +L V L   S+ DF PDRIA+QVPEL+KLL
Sbjct: 61  DKNNFTSVMKEANLELNFSVPNRLEEDSQDDLPVKLSIGSLNDFSPDRIAQQVPELHKLL 120

Query: 118 QLREALVALKGPLGNVPTFRKQLQQLLNDAHARKQLAQELDLVLEA 163
           +LREALVALKGPLGN+P FR +LQ LL+   AR QL +ELDLV  A
Sbjct: 121 ELREALVALKGPLGNIPAFRNRLQDLLSSEEARAQLLKELDLVKPA 166