Pairwise Alignments

Query, 488 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 478 a.a., type VI secretion system protein TssA from Dickeya dianthicola ME23

 Score =  160 bits (406), Expect = 7e-44
 Identities = 124/477 (25%), Positives = 206/477 (43%), Gaps = 25/477 (5%)

Query: 14  RLLAPIDAQVPAGLFDGEDETYQAIDQEMVKLGGLQEASIDWDYIEEASAQYLERQCKHL 73
           RLL  +           +D  ++ ++  +VKLG L  + +D + +       LE + K +
Sbjct: 9   RLLTALPDDALRAAVAADDPLWEKVETALVKLGSLAHSQVDLNAVAGQCLTLLESRTKDM 68

Query: 74  RIVAHLSVAWLRSGCWERWGFTLALLGGMIDNYWETAHPTPGPKGFLTKRKIVGLLFNRL 133
           R++  L            +   + LL   ++ YW  A P       + K+K++  +  R 
Sbjct: 69  RVLVQLLRCLQHPAKATPFATAIMLLDSWLEAYWTLAFPASA----VQKQKLMVQIIRRF 124

Query: 134 IDALPRL----DRFTYTPAHAAAAKGALARLLRQQEAAQLAPAVLVELERLLHKHTA--- 186
              LPR+         +  H  A + A        + A+L   +   L R   +H A   
Sbjct: 125 EGVLPRVAENASGAELSQLHQLAEQLAARWRTLAADKAELTDELAASLHRARQRHQAQEK 184

Query: 187 -------LANGIGERDAPKAPVESPQ-PAPLADVIATPKPCLSGGNERETRRAILSMAEL 238
                   + G G      A        +  A   AT    ++  ++R  ++  L++A L
Sbjct: 185 ANQAAEPASGGPGGTSGGDAAAGGGNGGSGTASAAATVD--INSSDDRHWKQTQLTVAAL 242

Query: 239 INQQDPYDPTGYQLRRFGLWAHIQAAPQTRQCNRTELMAVPRDIASDYEEAIAGTVIDAA 298
           + ++ P  P GY+LRR  +WA I   P   + N+T+L  V  D   +Y  A+A    D A
Sbjct: 243 LAERQPEAPVGYRLRRNAVWAGIATPPPAARGNKTQLAPVSPDRVDEYHSALAQA--DLA 300

Query: 299 LLQRVEKSVSASPFWIRGSFLAATAASRLAMGEVAEAIRAATARFVLRMPALQQLCFSDG 358
           L  ++E+S++ +P+W  G  L+AT A+RL    VA AI    + F+ R+P L++L FSDG
Sbjct: 301 LWNKIEQSLTLAPYWFDGHLLSATVATRLGHSAVAGAIADELSAFLARLPELRELAFSDG 360

Query: 359 RVFVDDQCLAWLKGADGQSEQAEASQEFTSLREELVSQLESGGVEPVLLRLQGMQADFRA 418
             F+  +C  WL+ A  QS +    Q    L  E  +     G+   L  L       + 
Sbjct: 361 SPFLSAKCAQWLQSA--QSARGGGGQRQDDLAAEAAACCAEQGLGAALSLLDERIRRLKE 418

Query: 419 PRERCHTTLIAADLLAARGVSWLAQDLCAGVARTMQQTTASDWEPEVFQRLQQYASS 475
           PRER    L+ ADLLA  G+  LA      + +  ++     WEP +  RL++  +S
Sbjct: 419 PRERFCAELVLADLLAEEGMKALAAQHYQHLWQESERLGLMQWEPGMVSRLERLGAS 475