Pairwise Alignments

Query, 488 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 479 a.a., type VI secretion system protein TssA from Dickeya dianthicola 67-19

 Score =  160 bits (406), Expect = 7e-44
 Identities = 125/482 (25%), Positives = 206/482 (42%), Gaps = 34/482 (7%)

Query: 14  RLLAPIDAQVPAGLFDGEDETYQAIDQEMVKLGGLQEASIDWDYIEEASAQYLERQCKHL 73
           RLL  +           +D  ++ ++ E+VKLG L  + +D + +       LE + K +
Sbjct: 9   RLLTALPDDALRAAVAADDPLWEKVETELVKLGSLAHSQVDLNAVAGQCLTLLESRTKDM 68

Query: 74  RIVAHLSVAWLRSGCWERWGFTLALLGGMIDNYWETAHPTPGPKGFLTKRKIVGLLFNRL 133
           R++  L            +   + LL   ++ YW  A P       + K+K++  +  R 
Sbjct: 69  RVLVQLLRCLQHPAKATPFATAIMLLDSWLEAYWTLAFPASP----VQKQKLMVQIIRRF 124

Query: 134 IDALPR---------LDRFTYTPAHAAAAKGALARLLRQQEAAQLAPAVLVELERLLHKH 184
              LPR         L +        AA   ALA      + A+L   +   L R   +H
Sbjct: 125 EGVLPRVAENASGAELSQLYQLAEQLAARWSALAA-----DKAELTDELAAALHRARQRH 179

Query: 185 TA----------LANGIGERDAPKAPVESPQP-APLADVIATPKPCLSGGNERETRRAIL 233
            A           + G G  +   A        A      A     ++  ++R  ++  L
Sbjct: 180 QAQEKANQAAEPASGGPGGTNGGTAAANGGNGNAAAGTASAAATVDINSSDDRHWKQTQL 239

Query: 234 SMAELINQQDPYDPTGYQLRRFGLWAHIQAAPQTRQCNRTELMAVPRDIASDYEEAIAGT 293
           ++A L+ ++ P  P GY+LRR  +WA I   P + + N+T+L  V  D   +Y+ A+A  
Sbjct: 240 TVAALLAERQPEAPVGYRLRRNAVWAGIATPPPSARGNKTQLAPVSPDRVDEYQSALAQA 299

Query: 294 VIDAALLQRVEKSVSASPFWIRGSFLAATAASRLAMGEVAEAIRAATARFVLRMPALQQL 353
             D AL  ++E+S++ +P+W  G  L+AT A+RL    VA AI    + F+ R+P L++L
Sbjct: 300 --DLALWNKIEQSLTLAPYWFDGHLLSATVATRLGHSAVAGAIADELSAFLARLPELREL 357

Query: 354 CFSDGRVFVDDQCLAWLKGADGQSEQAEASQEFTSLREELVSQLESGGVEPVLLRLQGMQ 413
            FSDG  F+  +C  WL+ A          Q    L  E  +     G+   L  L    
Sbjct: 358 AFSDGSPFLSAKCAQWLQSA---QPARGGGQRQDDLAAEAAACCAEQGLSAALSLLDERI 414

Query: 414 ADFRAPRERCHTTLIAADLLAARGVSWLAQDLCAGVARTMQQTTASDWEPEVFQRLQQYA 473
              + PRER    L+ ADLLA  G+  LA      + +  ++     WEP +  RL++  
Sbjct: 415 RRLKEPRERFCAELVLADLLAEEGMKALAAQHYQHLWQESERLGLMQWEPGMVSRLERLG 474

Query: 474 SS 475
           +S
Sbjct: 475 AS 476