Pairwise Alignments

Query, 1208 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 370 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 56.6 bits (135), Expect = 4e-12
 Identities = 82/364 (22%), Positives = 133/364 (36%), Gaps = 48/364 (13%)

Query: 58  HRSMASLVFVLVALLSWLVVLRTRFRRLQAERQQAMAAEVDPTQPFVHAQEKA---LSQG 114
           HR    LV  L        V+R   R     R++A+A  ++       + + A   L  G
Sbjct: 9   HRFWLLLVLCLTGFALLYGVVRDAGR---GARRRALARRIEALGTQAGSADMAAASLGDG 65

Query: 115 LARYLDNAGGRRALYRLPWYLVLGARQAGKSSFIDCTDQSFSLTRIDKAQARGRPAQALA 174
           +A+        R+   +PW+L  G   A     +          R+   +A G  A A  
Sbjct: 66  MAQAQQAMKRGRSRAPVPWFLFFGDAAANLPGLLAAGHGE----RMPAREADGAKADACW 121

Query: 175 YPVGWWISNDAVIIDPPGAFISQNGPADSLGSDSTDVESSVPSGTQAK--LWQHLLDWLQ 232
           +   WW++   V I+ P          D++G           +GT A+  LW   L  L 
Sbjct: 122 H---WWLTAATVAIEVP---------PDAVGD---------AAGTPAQRGLWLQSLLALA 160

Query: 233 RNRSQRALNGLVLVVDLPALLHGTVEQRTALAHLLRTRLYEVSSQLGSRLPLYVVLSKFD 292
             R +  LNG+V  V    LLH       ALA  +R  L E S  L  ++P Y+V++  +
Sbjct: 161 ERRHRLPLNGMVACVAARDLLHADESDLAALAARMRRLLDETSDTLRLQMPAYLVVTGLE 220

Query: 293 LLDGFDQFYSKLSAAKRNSLFGF-------TFKLDAVDTFDAWLGEYGEHYDRLLEQLFE 345
            L G+   +  L     +   G             A +  DA      +H   L   L  
Sbjct: 221 QLPGYAVLHRALPPEALSQAVGHRLTDPSPVIATPAAERLDAVFDPLAQHLHALRMSLLR 280

Query: 346 QVIDRLDVQGSPALRSRLYSLHRQLLGLRPMLLSFLRETLAS-DRFTTPALVRGVYWSSV 404
           +       Q   A R  ++     +  L+P L +F +    +  + T     RG+Y ++ 
Sbjct: 281 E-------QAGAADRLAVHEFVEAVRALQPGLRTFAQVLFENHGKGTRAPRWRGLYLTAA 333

Query: 405 VQHG 408
             +G
Sbjct: 334 ASNG 337