Pairwise Alignments

Query, 1208 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 831 a.a., OmpA domain protein from Pseudomonas putida KT2440

 Score =  152 bits (384), Expect = 1e-40
 Identities = 148/586 (25%), Positives = 252/586 (43%), Gaps = 59/586 (10%)

Query: 24  PLLLGLGAVLMLVAIWWLGPQWTWRDQQPLASVAHRSMASL-VFVLVALLSWLVVLRTRF 82
           P LLG+   L +  +W +G  + +          H  +A + VF+L++    L++ R   
Sbjct: 13  PYLLGVAFFLAIFLVWAIGRAFGFAS-------LHSLLAGIGVFLLLSAGYVLLLYRGVG 65

Query: 83  RR------LQAERQQAMAAEVDPTQPFVHAQEKALSQGLARYLDN----AGGRRALYRLP 132
           +       L+ +  QA+ +     +  V    + L QG+ R   N       + ALY LP
Sbjct: 66  QHHNLEGLLRDDADQAVLSAAPADREEVSLLRERLLQGIERLHSNKPRGTSNKDALYALP 125

Query: 133 WYLVLGARQAGKSSFIDCTDQSFSLTRIDKAQARGRPAQALAYPVGWWISNDAVIIDPPG 192
           WYLV+G   AGKS+ I  +  +F     +  +  G           W+ S++AV++D  G
Sbjct: 126 WYLVIGQPAAGKSTMILQSGLNFPYAEREGVRVAGLGGTRNC---DWFFSSEAVLLDTAG 182

Query: 193 AFISQNGPADSLGSDSTDVESSVPSGTQAKLWQHLLDWLQRNRSQRALNGLVLVVDLPAL 252
            +++                    S  +A  W+  L  L+++R +R LNGL++ V +  +
Sbjct: 183 RYMN--------------------SPEEAGKWRGFLQLLRQHRQRRPLNGLIVSVSIADI 222

Query: 253 LHGTVEQRTALAHLLRTRLYEVSSQLGSRLPLYVVLSKFDLLDGFDQFYSKLSAAKRNSL 312
           LHG+VE +  +A  LR R+ E  + L  RLP+Y+V +K DL+ GF  FY +L  A R  +
Sbjct: 223 LHGSVEDQERVAKRLRERIQESCALLEVRLPIYLVFTKCDLIPGFTAFYRQLDDAARGEV 282

Query: 313 FGFTFKLDAVDTFDAWLGEYGEHYDRLLE---QLFEQVIDRLDVQGSPALRSRLYSLHRQ 369
            G TF     +  D W   +    D L     Q+  Q + + D+Q +       Y    +
Sbjct: 283 MGKTFSHKGYEQAD-WGQRFSNAMDELTRYWGQMASQQLVQQDIQVT-RRNDAAYRFPLE 340

Query: 370 LLGLRPMLLSFLRETLASDRFTTPALVRGVYWSSVVQHGDVR-NAFVREAAQPYKTSLPL 428
           L  L+P L  F+   L ++ +    ++RG Y+++ +Q  + +     +  A+ +      
Sbjct: 341 LAALKPRLHQFVDSLLRANPYQNAEMLRGFYFTAALQADEAQWGCHGQHVAERFALEHAE 400

Query: 429 LEGKPQAKALAYFIQQAFGRVIYKEAGLAG---DNVRVARRKRQLLWVGSSVGVLAFCVA 485
             G   ++    FI   F +VI  +  L      N R  RRK    WVG++   LA  V 
Sbjct: 401 GTGTAGSQPAPLFINSLFRKVIIPDQHLVALYTSNHRERRRKAG--WVGAA--GLAALVL 456

Query: 486 IASWHRYFDINGVKAASVLAKSREYSHHEVDQRLDPTGRNLLEPLDQIRDAVAVFGDYRA 545
            + W   +  N    AS+   + E +  + D +           LD++R   A + +   
Sbjct: 457 CSLWGWSYLNNRATLASI---ADELAQAKADDQAASGQYTAWRSLDRLRFWAAHYHEQHH 513

Query: 546 A--WPGVADLGLYQGRTIGPTVDEAYLSLLSRRFLPALASGVIEAM 589
           A   P    LGLYQG  + P + + Y + L    L   A  +   +
Sbjct: 514 AKGVPLGMRLGLYQGHEVEPLLRDRYFATLQNVMLKPTADNLTRTL 559