Pairwise Alignments

Query, 1208 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 1159 a.a., IcmF family protein from Agrobacterium fabrum C58

 Score =  237 bits (605), Expect = 4e-66
 Identities = 263/1188 (22%), Positives = 470/1188 (39%), Gaps = 89/1188 (7%)

Query: 29   LGAVLMLVAIWWLGPQWTWRDQQPLASVAHRSMASLVFVLVALLSWLVVLRTRFRRLQAE 88
            L  + + V +W+ G      D +PL +V  R +A  + V V L+ +++V   R R+   E
Sbjct: 29   LWVIALCVVVWFYGYLIALGDFKPLGTVQARLIAIGIIVAVWLV-YIIVTIYRGRKQDKE 87

Query: 89   RQQAMAAE-VDPTQPFVHAQEKALSQGLARYLDNAGGRRA--LYRLPWYLVLGARQAGKS 145
               ++  E +   Q  +   +  L + LA  L     +R   +Y LPWY++ GA  +GK+
Sbjct: 88   LVDSIEREALANRQAEIGEIQTRLKEALA-LLRRVTKKRFGYIYDLPWYVIFGAPGSGKT 146

Query: 146  SFIDCTDQSFSLTRIDKAQARGRPAQALAYPVGWWISNDAVIIDPPGAFISQNGPADSLG 205
            + +  +   F L   D                 WW +++A++ID  G + +Q+       
Sbjct: 147  TALTNSGLQFPLG--DALGENAVKGIGGTRNCNWWFADEAILIDTAGRYTTQD------- 197

Query: 206  SDSTDVESSVPSGTQAKLWQHLLDWLQRNRSQRALNGLVLVVDLPALLHGTVEQRTALAH 265
                D++ S  +G     W+  L  L+R R  + +NG ++ + +P LL+   E++     
Sbjct: 198  ----DLDGSSKAG-----WEGFLGLLRRYRRSQPINGALVTLSIPDLLNRDPEEQRQELR 248

Query: 266  LLRTRLYEVSSQLGSRLPLYVVLSKFDLLDGFDQFYSKLSAAKRNSLFGFTFKLDAVDTF 325
             +R RL E+   L +R+P+Y+VL+K DLL GF +F+   +   R  ++G TFKLD   + 
Sbjct: 249  SIRQRLSELDEYLHARVPVYIVLTKADLLHGFVEFFDGFNKTDRQQVWGTTFKLDESYSA 308

Query: 326  DAWLGEYGEHYDRLLEQLFEQVIDRLDVQGSPALRSRLYSLHRQLLGLRPMLLSFLRETL 385
            +       E ++ L +++   +I+RL  + +  +R R++    +L  L+  L   L E  
Sbjct: 309  ENLPQRLTEEFELLQQRVDAMLIERLQQEQNAEIRGRIFRFPAELARLKDRLHEALAELC 368

Query: 386  ASDRFTTPALVRGVYWSSVVQHGDVRNAFVREAAQPYKTSLPLLEGKPQAKAL--AYFIQ 443
            AS       L+RGVY++S  Q                    P  E  P A     +YF+ 
Sbjct: 369  ASSPLIEAPLLRGVYFASGTQ--------------------PETEKSPAASRTRRSYFLS 408

Query: 444  QAFGRVIYKEAGLAGDNVRVARRKRQLLWVGSSVGVLAFCVAIASWHRYFDINGVKAASV 503
            + F  VI+ EA L   + R++RR+  +  +  +V   A  +    W   +  N    A  
Sbjct: 409  RLFKDVIFPEAALVTRDKRLSRRQLLVRRIAYAVSATAVAIVFTGWIFTYFANTQALAEA 468

Query: 504  LAKSREYSH----HEVDQRLDPTGRNLLEPLDQIRDAVAVFGDYRAAWPGVADLGLYQGR 559
              K   Y        V +  D     +L  LD +RD  + F   R  W      GL Q  
Sbjct: 469  DRKLGAYEQLVQGIPVREVADADFLRILPALDNLRDVNSGFARER-VWN--VSFGLDQED 525

Query: 560  TIGPTVDEAYLSLLSRRFLPALASGVIEAMDAAPPGSEQQMAALRVYRMLEDRRNRRAEW 619
             I     +AY   L+   LP +   + + +      + +   +L++Y ML        ++
Sbjct: 526  KIAGRQRDAYQRALNALLLPRMIVQLQKQLKDEKDVT-RTFNSLKLYGMLGGMGGLDRDF 584

Query: 620  VEDWMARQWQQAFPGQGQ--LQRDLMRHLKYALTYADTDLPQYRQRVSHVQQTLRKVPLP 677
            +     + +   +PG G+   +  L +H K         +    + ++  ++T+R   + 
Sbjct: 585  LTTQTHQMFASLYPGDGRAAAREALDQHAKALADGVLAPIELDARLIATARETIRDQAIG 644

Query: 678  QRVY---AGLKQQAQEQLHTGLDLRHQVGPAFDVVYQLSSGSSQGDNGVLLAPMLTAKGF 734
             R Y   AGL Q  +    T        GP  +  ++  S +   +    +  + TA G+
Sbjct: 645  TRAYDILAGLPQVRELMEWTPAT---AFGPLGERAFERRSKAPMAEG---IEGLFTADGY 698

Query: 735  KEYFEPRSQRFTEMAMIDQWALGERAQLDYSDADQAALNERLRNLYSADYIDSWRRALNA 794
            +    P+      +A+ + W  G    +  +  +Q A  +    +Y   +   W   L+ 
Sbjct: 699  RRVVIPQVAHAARVALSEGWVRGSDDAIKGATVEQVA--QAALQIYFDRFEKIWADTLSD 756

Query: 795  FSVADFRDLDHGVTILEQLAGPAAPLHRLLETVRD--------NSSLLSPVNVGVADEAP 846
              V   + L   V     LA     +     ++ +        N + L+    G A  A 
Sbjct: 757  LRVKPSQSLGDAVETTRALANERNIVVEAARSIAEATDLRPGANPAALASAAEGDATAAV 816

Query: 847  SPVSINSKPE----QQQALVIQRAFAGLSAMLHAAGEKPSYYDETHAAIVAVHDYAKAVQ 902
               ++N+       +        A  G        G  PS     H  ++     A++  
Sbjct: 817  LAATVNAADPYARLRDMLATKGAATTGEQPNGDKTGGSPSEQLLAHFKLLN-EQLARSAT 875

Query: 903  GSPDRGKAALHAVHQRFSMTGHDPIGTLQRVATGLPEPINHHVRKVAHQTAQVLNVEALR 962
             S +  K  +  V  + +    D    L + A  LP P++  V  VA     +    A  
Sbjct: 876  TSDEVAK--VFDVDSQLTKANQD----LLQQARELPAPLDVWVAGVAADVGSLAVKSARS 929

Query: 963  ELERRWDAEVYSFFQQRLAERYPF-VVRAPDASLEDFEAFFGPNGRLQQFQDQYLKLFL- 1020
             +   W A+  S     +  RYPF    + D ++ DF   F P G  Q F  Q ++ F+ 
Sbjct: 930  RIAELWTADSASLCSSIVTGRYPFDRASSRDVAIADFTRLFAPTGVFQSFFKQRMEPFVD 989

Query: 1021 KDNLEALQNGLQGRSLIRTDVIEQLERADRIRETFFDQRGNL-SVQFSIEPLGLSANQRT 1079
            K        G  G + I +  + Q E AD+I   FF       +V  +++P+ L+     
Sbjct: 990  KTTTPWSWKGTFGAAGIPSSAVAQFENADKISRAFFPNGSETPTVSINVKPVSLTNASSA 1049

Query: 1080 SLLDLDGQLISYTHGPSQITGIVWPNTLGQHVRSNLTLLRQNGNSSSLEYRGPWSMFRLL 1139
             +L+++G+ + Y HGP Q   I WP+       S +   +  G   +    G WS FRL 
Sbjct: 1050 VMLEIEGERVVYYHGPIQAKSITWPSRENTASLSRIA-FQPGGWQQAKTENGDWSPFRLF 1108

Query: 1140 SRGALNGRTATSVDLSFKTGDGVMRYRLNAEKAFNPITQQPFKGFRLP 1187
                +  ++   + + F+ G     + +      NP        F  P
Sbjct: 1109 DGANIENQSGELLRVRFENGVQAAEFDIQFGSVLNPFKLDAIASFACP 1156