Pairwise Alignments

Query, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

Subject, 544 a.a., AMP-binding protein from Pseudomonas simiae WCS417

 Score =  829 bits (2141), Expect = 0.0
 Identities = 408/559 (72%), Positives = 456/559 (81%), Gaps = 18/559 (3%)

Query: 1   MSQP--SYTRGRQDRPLLTQTIGQAFDATVARCCDSEALVSRHQGLRYSWRQLAEQVEIY 58
           M QP  SY+RG QD+ LL  TIGQAFD TVA+  D EALV RHQ  RY+WRQLAE V+++
Sbjct: 1   MDQPNQSYSRGSQDKTLLAMTIGQAFDRTVAQFPDGEALVVRHQQRRYTWRQLAETVDLH 60

Query: 59  ARALIALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGC 118
           ARA +ALG+ TGDR+GIW+PNCA+WCI Q+ASAK+G ILVNINPAYR  ELEYVL+QSGC
Sbjct: 61  ARAFLALGMQTGDRLGIWAPNCAEWCISQIASAKLGVILVNINPAYRSSELEYVLKQSGC 120

Query: 119 RWLVCAEAFKTSDYHTMVQELVPELASAAPGELASECLPELRGVISLAANPPAGFLPWHA 178
           +WLVCA +FKTSDYH M+Q L P+L                RG+ISL  +PP GFLPW  
Sbjct: 121 QWLVCAGSFKTSDYHAMLQALNPDL----------------RGMISLDPSPPPGFLPWAQ 164

Query: 179 FAERAGQTSVEACTARQQSLQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFMVGESLG 238
            A       +E   +RQ SL FDQ VNIQYTSGTTG PKGATLSH+NILNNG+MVGESLG
Sbjct: 165 LAALGTGIPLEQLHSRQTSLHFDQAVNIQYTSGTTGFPKGATLSHHNILNNGYMVGESLG 224

Query: 239 LTARDRMVIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGV 298
           LTA+DR+VIPVPLYHCFGMVM NLGCITHG+TMIYPND FD  LTL AVAEE AT LYGV
Sbjct: 225 LTAQDRLVIPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDPLLTLTAVAEEHATGLYGV 284

Query: 299 PTMFIAMLDHPSRAHMDLSTLRSGIMAGATCPIEVMRRVIDQMHMAEVQIAYGMTETSPV 358
           PTMFIAMLDHP     DLS+LR+GIMAGATCPIEVMRRVI +MHM+EVQIAYGMTETSPV
Sbjct: 285 PTMFIAMLDHPQLGGFDLSSLRTGIMAGATCPIEVMRRVISEMHMSEVQIAYGMTETSPV 344

Query: 359 SLQTGPDDDLELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQ 418
           SLQTG DDDLE RVTTVGRTQPQLENK++DADG  V RGEIGELCTRGYSVMLGYW+NP 
Sbjct: 345 SLQTGADDDLERRVTTVGRTQPQLENKIIDADGNTVARGEIGELCTRGYSVMLGYWNNPD 404

Query: 419 ATADAIDPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVAD 478
           AT +AID AGWMH+GDLA MD  GYV I GRNKDMIIRGGEN+YPRELEEFF+THPAVAD
Sbjct: 405 ATREAIDDAGWMHTGDLASMDAHGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVAD 464

Query: 479 AQVIGIPCSRYGEEIVAWIKLHPGHSATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVT 538
            QVIGIP  RYGE IVAW+K HPGH A   ELQ WCK RIAHFK P++ +FV+E+PMTVT
Sbjct: 465 VQVIGIPDERYGEAIVAWVKFHPGHVANELELQTWCKGRIAHFKTPKHFKFVEEFPMTVT 524

Query: 539 GKVQKFRMREISVAEIAAA 557
           GK+QKFRMREIS+ E+  A
Sbjct: 525 GKIQKFRMREISIQELKNA 543