Pairwise Alignments

Query, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

Subject, 575 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  240 bits (613), Expect = 1e-67
 Identities = 182/554 (32%), Positives = 271/554 (48%), Gaps = 35/554 (6%)

Query: 10  RQDRPLLTQTIGQAFDATVARCCDSEALVSRHQGLRYSWRQLAEQVEIYARALIALGVNT 69
           R D  L  + + Q  D  VAR  +  A+    Q + Y  RQL   VE  A+ L  LGV  
Sbjct: 25  RWDAELPVKPVQQMLDEAVARWPEHSAVEFMGQVITY--RQLGAAVERAAKGLQDLGVKP 82

Query: 70  GDRVGIWSPNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKT 129
           G  VG++ PN   + I   A  K G  +VN +P      L + +  S    L+  +    
Sbjct: 83  GVHVGLYLPNTPHYPIAFFAVLKAGGTVVNYSPLDAERVLAHKIEDSRTDILITLDLVNL 142

Query: 130 SDYHTMVQEL----VPELASAAPGELAS---ECLPELRGVISLAANPPAG-FLPWHAFAE 181
             Y  M + L    + +L   + G+  +   +   +L+G   +A  P     L +    +
Sbjct: 143 --YPQMARLLDSSRLRKLVVGSLGDYGAAGDKVQAQLQGAGQIAPVPTDDRHLRFTDLLK 200

Query: 182 RAGQTSVEACTARQQSLQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFMVGES----- 236
             G           + +     V +QYT GTTG PKGA L+H N+ +      ES     
Sbjct: 201 SEGTHQTHPLGDLTEEI-----VVLQYTGGTTGLPKGAMLTHANLTSASAQYYESTKGDP 255

Query: 237 -LGLTARDRMVIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATIL 295
            +     +R ++ +PL+H F +  A L  +  G+ ++  +  FD +  +  +A  R ++ 
Sbjct: 256 PILDEGSERFLVVLPLFHIFALSAAMLLGVRLGAALVL-HTRFDVDAVMNELAASRISVF 314

Query: 296 YGVPTMFIAMLDHPSRAHMDLSTLRSGIMAGATCPIEVMRR--VIDQMHMAEVQIAYGMT 353
            GVPTM+ A+L HP    MDL +L+     GA  P+EV +R   +   H+ E    +GMT
Sbjct: 315 PGVPTMYTAILSHPKAKEMDLRSLKFCGSGGAPLPVEVEQRFFALTGCHLNE---GWGMT 371

Query: 354 ETSPVSLQTGPDDDLELRVTTVGRTQPQLENKLVDADGC---IVPRGEIGELCTRGYSVM 410
           ETSPV   T P   +  +  + G   PQ+  KLV  D     +   GE GELC +G +VM
Sbjct: 372 ETSPVGTFT-PARGVR-KAGSCGMPLPQVRIKLVSLDDPSKDVTAFGEAGELCIKGPNVM 429

Query: 411 LGYWDNPQATADAIDPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFF 470
            GYW+NP+ATA+++ P G+  SGD+A MD  GY  IV R KDM++ GG N+YPR LEE  
Sbjct: 430 KGYWNNPKATAESMTPDGYFRSGDVAKMDADGYFYIVDRTKDMLLCGGYNVYPRVLEEAV 489

Query: 471 YTHPAVADAQVIGIPCSRYGEEIVAWIKLHPG-HSATVEELQGWCKARIAHFKVPRYIRF 529
           Y HPAVA+  VIGIP    G+   A++KL  G    T++ L+ + K R+   ++   +  
Sbjct: 490 YEHPAVAEVCVIGIPDEYRGQSPKAFVKLKEGAGELTLDALKAFLKDRLGKHEMIGALEI 549

Query: 530 VDEYPMTVTGKVQK 543
             E P T  GK+ K
Sbjct: 550 RAELPKTAVGKLSK 563