Pairwise Alignments

Query, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

Subject, 538 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

 Score =  226 bits (575), Expect = 2e-63
 Identities = 164/549 (29%), Positives = 269/549 (48%), Gaps = 51/549 (9%)

Query: 8   RGRQDRPLLTQ-----TIGQAFDATVARCCDSEALVSRHQGLRYSWRQLAEQVEIYARAL 62
           RG +  P +T       +G     +  R  D  A+++  + + +   QL E     A  L
Sbjct: 25  RGLEPSPEVTGGLGRIALGDLLRRSARRFPDKAAVITPSRTITFG--QLDEMANRCANML 82

Query: 63  IALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLV 122
              G   GDR+     N   + I+     K G + V INP     +  Y+L  +   +++
Sbjct: 83  RNEGAKPGDRIATICSNSIDFIIVIFGLHKAGLVWVPINPLIAADDRAYILNHTEASFVI 142

Query: 123 CAEAFKTSDYHTMVQELVPELASAAPGELASECLPELRGVISLAANPPAGFLPWHAFAER 182
                  +D H  +Q ++PE A  +P  LA   L E       +A+P    LP H     
Sbjct: 143 -------ADEH--IQNVIPEGAGGSPPVLA---LGEAFDTRLSSASPKEPDLPIH----- 185

Query: 183 AGQTSVEACTARQQSLQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFM---VGESLGL 239
                       ++ L       I YTSGTT  PKG  + H N+     +   +GE + +
Sbjct: 186 ------------ERDLAM-----IMYTSGTTSRPKG--VMHCNLAVYATVMCNIGEWM-V 225

Query: 240 TARDRMVIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGVP 299
           T +DR++I +PL+H     +     +  G+T++  N  FD      A+ +E+ +   G+P
Sbjct: 226 TRKDRILIVLPLFHVSAHCLFTT-FMAAGATVVLHN-GFDPGQVAAAIEDEKVSFFVGLP 283

Query: 300 TMFIAMLDHPSRAHMDLSTLRSGIMAGATCPIEVMRRVIDQMHMAEVQIAYGMTETSPVS 359
            M+ A++DHP R   D S+LR  I A A  P  ++RR++ +     V ++ G TE  P +
Sbjct: 284 MMYAAVMDHPIRMTTDFSSLRYCIYAMAPMPGPLLRRLLSEFCPTFV-LSSGQTEMYPST 342

Query: 360 LQTGPDDDLELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQA 419
               P+  L       G      +  ++D DG ++P G++GE+  RG +VMLGY+ +  A
Sbjct: 343 AMLRPEQQLLKEGNYWGEPSIVNDMAIMDDDGTLLPPGQVGEIVHRGPNVMLGYYKDEAA 402

Query: 420 TADAIDPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADA 479
           TA +    GW H+GDL V+DE G +  V R KD+I  GGEN+   ++E+    HP++ +A
Sbjct: 403 TAHS-RRFGWHHTGDLGVIDEDGQLLFVDRLKDIIKSGGENVASVKVEQVLLQHPSIGNA 461

Query: 480 QVIGIPCSRYGEEIVAWIKLHPGHSATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVTG 539
             IG+P  R+ E +VA + L PG +A  +E+   C+A +A  +VP+ ++FVD+ P+T T 
Sbjct: 462 AAIGVPHPRWQEAVVAVVMLKPGSTAGAQEILDHCRAALAPHEVPKAVQFVDDLPLTATS 521

Query: 540 KVQKFRMRE 548
           K++K  +R+
Sbjct: 522 KLRKVELRD 530