Pairwise Alignments

Query, 358 a.a., conserved membrane protein of unknown function with autotransporter beta-domain from Pseudomonas putida KT2440

Subject, 1679 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 84.7 bits (208), Expect = 2e-20
 Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 16/237 (6%)

Query: 133  RAGIFVGHNNLQSSFRGARPLLGDKQRKAVNLSGESLGVYWSMTHEQGWHLDAVAMGSRI 192
            RAGI+VG  +  +   G    + +      +L  + +GVY + T + G++ DAV    R 
Sbjct: 1448 RAGIYVGQLDGDARVNGFASGIQNLGVGRNDLRSQYVGVYGTYTSDSGFYADAVVQSGRH 1507

Query: 193  -----DVMGRGENGQRLDDSGHAMTFSVEGGYPIRLGGN-WVIEPQAQLINQQFFPGNQV 246
                  +MG G  G+     G+++  S+E G    +G + W +EPQ QLI+Q     N  
Sbjct: 1508 RYTVEPLMGLGAAGK-----GNSLLGSIEVGQAFPIGSSGWTVEPQLQLIHQHMDLSNSA 1562

Query: 247  QEETLQAFDSQPSWSGRVGAKLSGRYEVRGMPIEPYVRTNVWYDFSNADEVKL---DQVD 303
                +    +   W  R G ++ G+ +     ++PY R NV+   S AD  +        
Sbjct: 1563 IVGAIAQPQADSGWVARAGVRVKGQIDTGMGALQPYGRFNVYKTSSGADIARFVNGATTT 1622

Query: 304  KISSSRYSTTVELGLGLVARVTPSVALF--VSADYSSDVDDNDLNGLIGSLGVRMRW 358
             I++    T  EL  G    +  S +L+  V   +SS  D    +G+ GSLGVR++W
Sbjct: 1623 DIAAPTGGTNTELAGGFTLGLNASTSLYGEVGKLWSSGGDAKVKSGISGSLGVRVKW 1679