Pairwise Alignments

Query, 358 a.a., conserved membrane protein of unknown function with autotransporter beta-domain from Pseudomonas putida KT2440

Subject, 825 a.a., Outer membrane autotransporter from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 9e-41
 Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 7/320 (2%)

Query: 44  LQQPVAAQLSLDPLSASGLSLGTLNAFSQQMSERHQQPAPDLIASQWAQFFPTSAR---- 99
           L +P     +  P  A+ ++   L  F Q+  ++        + + W Q +  + R    
Sbjct: 508 LYRPEVPVYAAAPRGAAIIARQALGTFHQRQGDQLLLQGESALPASWGQAYGGTLRQQWS 567

Query: 100 GRALPPAQLEAPSQQLMIGPDLFVRETAAGDVHRAGIFVGHNNLQSSFRGARPLLGDKQR 159
           G   P   L+       +G DL+ +    G     GI+V H+ L +  +G    + D+  
Sbjct: 568 GTVSP--SLDGDLYGFKVGQDLYAKVGDNGYRQHVGIYVSHSRLDADVKGFALAVHDRSV 625

Query: 160 KAVNLSGESLGVYWSMTHEQGWHLDAVAMGSRIDVMGRGENGQRLDDSGHAMTFSVEGGY 219
             + L G+S+G YW++   QG +LDAV   +R+D   R E G  L+  GHA T S+E GY
Sbjct: 626 GDLKLDGDSVGTYWTLVGPQGAYLDAVLQYTRLDGRARSERGDTLNLDGHAWTASLESGY 685

Query: 220 PIRLGGNWVIEPQAQLINQQFFPGNQVQEETLQAFDSQPSWSGRVGAKLSGRYE-VRGMP 278
           PI L   W +EPQAQLI Q+    +     +  + D+Q   +GR+G +L G +    G  
Sbjct: 686 PITLSERWRVEPQAQLIAQKVALESARDSVSRISHDAQVELTGRLGLRLEGAFTGSSGRL 745

Query: 279 IEPYVRTNVWYDFSNADEVKLDQVDKISSSRYSTTVELGLGLVARVTPSVALFVSADYSS 338
           ++P+ + N+W+     D +  D  DKI +    T+V+L  G+VA+V  +++L     Y++
Sbjct: 746 LQPFAQVNLWHGDGGRDTLTFDDADKIKTDYRYTSVQLESGVVAQVNEALSLHGGVQYTA 805

Query: 339 DVDDNDLNGLIGSLGVRMRW 358
           ++D         +LGVR ++
Sbjct: 806 NLDSRQQEASGVNLGVRWQF 825