Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 788 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  239 bits (610), Expect = 4e-67
 Identities = 175/533 (32%), Positives = 260/533 (48%), Gaps = 39/533 (7%)

Query: 28  ETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADRPLRHVHGLVSAFS----QGET 83
           E L++ F   ++L+S  + ID   VL KP    + +A  P R + G V  FS    +G T
Sbjct: 25  EGLSRLFDFEVDLLSPSAAIDLQSVLGKPLSLEIKTAGAP-RFLSGQVVRFSMIGREGRT 83

Query: 84  GFCRTRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGITRFELKSSAQHQVRE 143
               T Y A V P L      S +RIFQ KTV ++LE +F       FE K +A ++  E
Sbjct: 84  SR-HTVYRASVRPSLWYLTRTSGFRIFQNKTVVEMLEEVFADYDFA-FEKKLTASYRQWE 141

Query: 144 FCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFGLLSRGALKAEDDEAL 203
            C Q  E+D  F+ RL   EG  Y F+H   +HTL++ D +        GA         
Sbjct: 142 HCAQYNESDFAFVSRLMELEGIYYYFKHEQNEHTLVLADDI--------GA--------- 184

Query: 204 WLDEDDVGPDKVLYHASSGG-DQARACLRRLRYCEQVRTARQVQRDYTFTNPAYRQEHKA 262
              E   G + + Y AS     +    +   R   +VRT R    D+ FT P     +  
Sbjct: 185 --HEPMPGYETIDYFASDREVTEDIEVIDEWRVTGEVRTGRYTVDDFNFTTPGSDLTN-V 241

Query: 263 QTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALRHDACLAEVQGDDVRLQTGLSF 322
           ++    H   DYE +++ G Y     G+ +   RL   +     +E       +  G  F
Sbjct: 242 RSQPQPHDHADYEMYEWLGEYTNAGEGEHYARVRLEEAQALGERSEGHATVRGMAPGYKF 301

Query: 323 TLVGHPREDLNVHWRVISLCHEGTQLTSLQEE--AAGAEQGTRYVNDALLVQGMAEWRPA 380
           T+ G  RE+ N  + ++S+ +      +L+E   A+G EQG            +    P 
Sbjct: 302 TMRGSAREEDNREYLIVSVAY------ALREGGYASGVEQGEYGFGFVAQPTSLPYRAPR 355

Query: 381 PMAKPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESKNNEFSSCWVWVSQGWAGG 440
             + PR  GP  A VVGP G+EI+ D++GRVKV F WDR  + NE  SC+V VSQ +AG 
Sbjct: 356 VTSVPRTSGPQTAVVVGPEGKEIWTDQYGRVKVQFRWDRSGRRNENCSCFVRVSQVFAGD 415

Query: 441 SWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKTRMTIKSQTHKGD 500
            +G++  PRIGQ+VIV ++ G  D+P+ITGR Y    +PP+DLP   T+  + +++  G 
Sbjct: 416 GFGAVFTPRIGQEVIVDFIGGLADRPIITGRVYNPRHMPPFDLPGEDTKSGLVTRSTPGG 475

Query: 501 G---FNELRFEDELGRQEVFIHAERDQNNVVKHNETTLIGNDRSERVEHDEVV 550
                N L FED +G + V +HAER+ N  V+ +ET   G  R+  +E  +V+
Sbjct: 476 SPATANSLVFEDRIGAEFVALHAERNLNVSVEADETHDTGGSRTTVIEGPDVL 528