Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 839 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  229 bits (583), Expect = 6e-64
 Identities = 155/503 (30%), Positives = 239/503 (47%), Gaps = 31/503 (6%)

Query: 28  ETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADRPLRHVHGLVSAFSQGETGFCR 87
           E L+Q    ++EL+   + ID   +L K A  ++ +     RH+ G+V+ F         
Sbjct: 14  EALSQANAFDVELLGNSNTIDAKALLGKAATVSMQTGHGGTRHLAGIVTRFGLAREDARH 73

Query: 88  TRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGITRFELKSSAQHQVREFCVQ 147
             Y   + P    A  R ++RIFQ + VP+I+  + +R G   FE K S  ++   +CVQ
Sbjct: 74  AFYAMRLRPWFWLATKRHDYRIFQDRGVPEIVAEVLERYGHP-FEQKLSRNYRNWTYCVQ 132

Query: 148 AGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFGLLSRGALKAEDDEALWLDE 207
            GE+D DF+ RL   EG  Y   H A QH L+  D + +    S   L            
Sbjct: 133 YGESDFDFVSRLCEHEGIYYYVRHEATQHVLVFADDIAN----SHSPLP----------- 177

Query: 208 DDVGPDKVLYH-----ASSGGDQARACLRRLRYCEQVRTARQVQRDYTFTNPAYRQEHKA 262
              G + V YH       +GG++    +      E++R+ R    DY F  P    + + 
Sbjct: 178 ---GGETVRYHPHEQSGMTGGEEPAERIYAWETGEELRSGRYGSDDYDFEKPKADLKSRR 234

Query: 263 QTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALRHDACLAEVQGDDVRLQTGLSF 322
           Q     H   D+E F++PG Y  ++ G  + +TR   L      A  + +   L  G + 
Sbjct: 235 QMPP-GHDHDDHEVFEWPGHYLLNSDGDAYAQTRNEELLSARNQAHGRSNLRSLAPGHTL 293

Query: 323 TLVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQGT--RYVNDALLVQGMAEWRPA 380
            L GHP E  N  + ++ + +   +     E       G+  R+  DA     MA   P 
Sbjct: 294 RLAGHPCEAQNRQYLLLGVAYHLQENLRATEGTGDTSGGSIQRFAFDAQPTS-MAWRAPR 352

Query: 381 PMAKPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESKNNEFSSCWVWVSQGWAGG 440
              KPR  GP  A VVGP G EI+ D+ GR+KV F WDR  + +E +SCW+ VS GWAGG
Sbjct: 353 TTPKPRTGGPQTAVVVGPAGHEIWTDQHGRIKVRFRWDRLGRADENASCWLRVSHGWAGG 412

Query: 441 SWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKTRMTIKSQTHKGD 500
            +G+ A+PRIGQ+V+V +++GDPD P++ GR +  D +P + LP  +T +T       G 
Sbjct: 413 HFGTAALPRIGQEVVVDFLDGDPDHPIVVGRFHNADAMPAWQLP-RETHLTSMRSRELGG 471

Query: 501 GF--NELRFEDELGRQEVFIHAE 521
               N L  +D  G+ +  + ++
Sbjct: 472 SLRGNHLVLDDSAGKVQAQLKSD 494