Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 681 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  295 bits (756), Expect = 4e-84
 Identities = 217/681 (31%), Positives = 326/681 (47%), Gaps = 65/681 (9%)

Query: 12  ALAGRTEFEVVSFKLDETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYS-------- 63
           +L G    E V  + DE L++ F   L L + E     G      A+  L          
Sbjct: 21  SLGGEPALEPVRIEGDEGLSRLFRYTLTLATPEQSGYSGRQAANVAIKQLVGEVLTVHIR 80

Query: 64  ------ADRPLRHVHGLVSAFSQGETGFCRTRYHAVVEPQLARARLRSNWRIFQQKTVPQ 117
                 A    RH+ GLV+          R  Y AV+EP L  A   +++RIFQ +TV  
Sbjct: 81  LDGRPGAGGSQRHISGLVTRVRFLRLENRRALYEAVIEPWLTLATRTNDFRIFQNQTVLA 140

Query: 118 ILELMFKRQGITRFELKSSAQHQVREFCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHT 177
           IL     +     FE+ +S  +  REF VQ GE+D DF+ RL  E G  Y FEH    H 
Sbjct: 141 ILSQTLGKYDFP-FEICASQNYPPREFQVQYGESDHDFMARLMHEWGLYYYFEHAEGAHK 199

Query: 178 LIVTDRLLSFGLLSRGALKAEDDEALWLDEDDVGPDKVLYHASSGGDQARACLRRLRYCE 237
           L+V D + +    +  A +                  + +HA+    +   C      CE
Sbjct: 200 LVVVDDMAAHKPFANAAYET-----------------IPFHAAEDTVREEHC-DSFNACE 241

Query: 238 QVRTARQVQRDYTFTNP-AYRQEHKAQTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETR 296
            +++ R V  D+ FT P A  Q+  A        +L  ER+ +PG Y  ++ G+    TR
Sbjct: 242 ALQSGRWVTSDFDFTRPKADLQQVSAMPRKTAQNTL--ERYGWPGDYAVESEGEQLVRTR 299

Query: 297 LTALRHDACLAEVQGDDVRLQTGLSFTLVGHPREDLNVHWRVISLCHEGTQLTSLQE--E 354
           +  +      A   G+   +  G   TL  HP+ + N  + V            +QE  E
Sbjct: 300 MEEVGSQGERASGSGNLRAVVPGCLITLERHPQSESNRQYLVTDA------RLHMQEPGE 353

Query: 355 AAGAEQGTRYVNDALLVQGMAEWRPAPMA-KPRIDGPHMATVVGPPGEEIYCDEWGRVKV 413
           A+G E     V+  ++  G     PAP A +PR  GP  A V GP G EI+ D++GRVK+
Sbjct: 354 ASGQEVFECRVDFDVISSGKVFRAPAPNAPRPRTSGPQTAIVTGPAGREIWTDQYGRVKL 413

Query: 414 SFPWDRESKNNEFSSCWVWVSQGWAGGSWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTY 473
           SF W+R    +E SSCWV VS  WAG ++G + IPRIGQ+VIV + NGDPD+P++TGR Y
Sbjct: 414 SFHWNRYCTKDENSSCWVRVSSPWAGTNFGGIQIPRIGQEVIVDFENGDPDRPIVTGRVY 473

Query: 474 CGDQLPPYDLPDHKTRMTIKSQTHKG---DGFNELRFEDELGRQEVFIHAERDQNNVVKH 530
             D +PP+ LPD+ T+  + +++ +G      N LRFED+ G+++V++HAER+Q+  V+ 
Sbjct: 474 NADNMPPWTLPDNATQSGLLTRSSEGATDANANALRFEDKKGQEQVWLHAERNQDIEVER 533

Query: 531 NETTLIGNDRSERVEHDEVVDIGGNRSVKVGASKRETVALGKVESI-------------- 576
           +ET  +G+DRS+ ++HDE V +  +R+  VG  +  T+   ++E+I              
Sbjct: 534 DETHWVGHDRSKTIDHDETVHVKHDRTETVGHDETITIGNNRMETIKANELLTVLQNMNR 593

Query: 577 --GLGKSLAVGGALSVMVGLEATEQVALDKRVQVGGQLRVDADEDVSITSHHGHVHIDSR 634
              L  S  VG A + +VGL  T  V   K   +G    +D  E + IT     + +   
Sbjct: 594 FVALTSSEEVGIAKTSLVGLTQTVAVGKSKNETIGEDFSLDVGEKLVITVGKSRLEMTKD 653

Query: 635 TSLTLSCGGAFIKLSDGRIEI 655
             +TL+ G  F   + G + I
Sbjct: 654 GQVTLT-GAKFDFRATGAVRI 673