Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 646 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  222 bits (565), Expect = 6e-62
 Identities = 175/622 (28%), Positives = 283/622 (45%), Gaps = 67/622 (10%)

Query: 11  QALAGRTEFEVVSFKLDETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADRPLRH 70
           Q   G  +  + +F+  E L++ F  +L + S    I    ++   A  TL   ++  R 
Sbjct: 15  QTALGPEDLLLDTFQATEGLSRLFACSLTMRSPLDTIKGADLIGTSATVTLQRPEKNARL 74

Query: 71  VHGLVSAFSQGETGFCRTRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGITR 130
            +G+VS F+   +      Y   + P++    L  +  I+Q  + P I++   K  G   
Sbjct: 75  FNGIVSRFTYLGSNQDFATYTLELVPRMWLLTLGRDRVIYQNLSTPDIVQ---KVLGDFA 131

Query: 131 FELKSSAQ--HQVREFCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFG 188
            + +++ +  +  RE+CV+  ET  DF+ RL  EEG  Y F   A  HTL++ D   ++ 
Sbjct: 132 VDCRTALEGTYAPREYCVRYDETAFDFVSRLMEEEGIFYFFTFTADSHTLVLADSKSAY- 190

Query: 189 LLSRGALKAEDDEALWLDEDDVGPDKVLYHASSGGDQARACLRRLRYCEQVRTARQVQRD 248
                             E      ++L  +  GG      + R     ++ T      D
Sbjct: 191 ------------------ESCPNAQELLVRSGEGGVGHTHSVTRFESDARLVTKDHEVDD 232

Query: 249 YTFTNPAYRQEHKAQTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALRHDACLAE 308
           Y F  P       A+ S    +  DYE   +P R    A        R+    H      
Sbjct: 233 YDFLTPD--TSLLAKNSAKAGRGSDYE---FPSRVAASAAS---ARARIRQEEHQVGSQS 284

Query: 309 VQGDDV--RLQTGLSFTLVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQGTRYVN 366
            +GD     L  G +F L  HPR DLN  + V S+ H                +   Y N
Sbjct: 285 GRGDSHCHYLTPGTTFKLKEHPRADLNDEYVVHSVHHHA--------------ENENYSN 330

Query: 367 DALLVQGMAEWRPAPMA-KPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESKNNE 425
               +     +RP  +  +P + G H A VVGP G E++ D+ GR+KV FPWDR  K ++
Sbjct: 331 SFETLPLNTPFRPPRLTPRPVVAGSHTARVVGPSGHEVWTDQHGRIKVQFPWDRLGKKDD 390

Query: 426 FSSCWVWVSQGWAGGSWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPD 485
            SSCW+ VSQ WAG  WG++ +PRIGQ+V+V YV+GDPD+P+++G  Y G  + P +LP 
Sbjct: 391 KSSCWMRVSQIWAGEGWGALFLPRIGQEVVVSYVDGDPDRPLVSGSVYNGTHVTPVELPS 450

Query: 486 HKTRMTIKSQT-HKGDGFNELRFEDELGRQEVFIHAERDQNNVVKHNETT--LIGNDRSE 542
             ++ TI+S++   G   NELRFED+   +E+++HA++D    ++++ TT  + GN+   
Sbjct: 451 ASSQSTIRSRSLPGGSAGNELRFEDKKDAEELYMHAQKDMRTEIENDLTTKVIAGNELHT 510

Query: 543 RVEHDEVVDIGGNRSVKVGASKRETVALGKVESIGLGKSLAVGGALSVMVGLEATEQVAL 602
             +        GNR+VKV           +  S+   ++L V G  +       T+ V+ 
Sbjct: 511 VTK--------GNRTVKVDTG-------NETHSVKGTRALEVTGNETHDNKANFTQTVSG 555

Query: 603 DKRVQVGGQLRVDADEDVSITS 624
           +  ++V G L +D    + I S
Sbjct: 556 NYELKVTGNLVIDVTGTLLIKS 577