Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 906 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  241 bits (616), Expect = 1e-67
 Identities = 155/473 (32%), Positives = 236/473 (49%), Gaps = 25/473 (5%)

Query: 28  ETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADRPLRHVHGLVSAFSQGETGFCR 87
           E L++ +  ++EL+S  + ID   +L +PA   + +     R++ G+ S F  GE    +
Sbjct: 14  EALSRLYAFDVELLSNSNGIDPKALLGRPATVAMQTESGGTRYLSGIASFFGLGEEDARQ 73

Query: 88  TRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGITRFELKSSAQHQVREFCVQ 147
           + Y   + P L  A LRS++RIFQ K+VP IL  +    G    E + S +++  ++CVQ
Sbjct: 74  SFYRMTLRPWLWLATLRSDFRIFQNKSVPDILTEVLGGYGYA-MEQRLSREYRAWDYCVQ 132

Query: 148 AGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFG--LLSRGALKAEDDEALWL 205
             E+D  ++ RL   EG  Y F H   +H L+  D + +    L   G ++    E   +
Sbjct: 133 YHESDFSYVSRLCELEGIGYYFRHEEHRHVLVFADDIAASHEPLPGGGTVRFHPSETSGM 192

Query: 206 DEDD-VGPDKVLYHASSGGDQARACLRRLRYCEQVRTARQVQRDYTFTNPAYRQEHKAQT 264
                  P + +Y   SG              E++R+      DY F  P+     + Q 
Sbjct: 193 TSGSRASPGERIYEWKSG--------------EEMRSGFHFTDDYDFLKPSADLSGQRQA 238

Query: 265 -SGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALRHDACLAEVQGDDVRLQTGLSFT 323
            +G TH    +ER+++PG YK+   G+ +T  R      + CLA  + +   L  G  F 
Sbjct: 239 PAGHTHDY--FERYEWPGGYKQHEDGEVYTRIRTEEQHSERCLASGRSNKRELAPGHVFE 296

Query: 324 LVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQGTRYVNDALLVQGMAEWRPAPMA 383
           L  HPR+D N  + + S+ +E  Q      E AG     R+  +A        WRP  + 
Sbjct: 297 LANHPRQDQNRKYLLTSVEYE-LQENMQASEGAGEGSVQRFAFEAQPADHA--WRPRRVT 353

Query: 384 -KPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESKNNEFSSCWVWVSQGWAGGSW 442
            KPR  GP  A VVGP  EE + D  GRVKV F WDR    NE SSCWV VS GWAG ++
Sbjct: 354 LKPRTRGPQTAIVVGPKNEETWTDRHGRVKVEFHWDRLGARNENSSCWVRVSMGWAGDTF 413

Query: 443 GSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKTRMTIKSQ 495
           G+ A+PR+G +V+V ++NGDPD P+ITGR +    +P + LP+      ++S+
Sbjct: 414 GTAALPRVGHEVVVDFLNGDPDCPIITGRVFNAANMPAWRLPEQANLSGMRSR 466