Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 780 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  247 bits (630), Expect = 2e-69
 Identities = 190/624 (30%), Positives = 299/624 (47%), Gaps = 50/624 (8%)

Query: 15  GRTEFEVVSFKLDETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADRPLRHVHGL 74
           G  + +  + +  E L+Q F   +++V    +I+   +L       L     P R ++G 
Sbjct: 12  GAEQLKFRAMRGQEGLSQLFEFEVDMVGTSFNIELKQLLGTSLTLELADDGGP-RFLNGT 70

Query: 75  VSAFS----QGETGFCRTRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGITR 130
           V  F       ETG     Y A+V+P L      ++ RIFQ K+VP++L+ +  + G   
Sbjct: 71  VVRFELVGRANETGR-HYIYRALVQPWLWYLTRTTDCRIFQNKSVPEVLDEVLGKYGF-E 128

Query: 131 FELKSSAQHQVREFCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFGLL 190
           FE + +A ++  E CVQ  E+D  F+ RL   EG  Y FEH    H L+++D    +  L
Sbjct: 129 FEKRLTASYRPWENCVQYQESDFAFVSRLMEHEGIAYHFEHGNGTHLLVLSDDTGGYSPL 188

Query: 191 SRGALKAEDDEALWLDEDDVGPDKVLYHASSGGDQARACLRRLRYCEQVRTARQVQRDYT 250
              A  A               D+VL       +    C+ + R  EQ+ + R +  D+ 
Sbjct: 189 PGHATIAYRPR-----------DRVL-------NAMEPCIDQWRVSEQITSGRVMLDDFD 230

Query: 251 FTNP-AYRQEHKAQTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALRHDACLAEV 309
           F    A  Q  +    G  H +  YE +++ G Y     G  + + RL  L+    LA  
Sbjct: 231 FKKSRASLQSVQQDPKGHDHST--YEVYEWLGGYSEHQQGDAYAKIRLQELQCAHELARG 288

Query: 310 QGDDVRLQTGLSFTLVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQGTRYVNDAL 369
             + V +  G  F +   PRE  N  + V    ++   L   +  + G+ +     +  +
Sbjct: 289 HTNVVGMAPGYLFQMTHCPREADNREYLVTETRYD---LQEPEYSSGGSSESVCEFDFTV 345

Query: 370 LVQGMAEWRPAPMA-KPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESKNNEFSS 428
           L   +A +RPA    +PR +GP  ATVVGP  EEI+ D +GRVK+ F WDR  + +E SS
Sbjct: 346 LPSSVA-YRPARNTPRPRTNGPQTATVVGP--EEIWTDRFGRVKLQFRWDRYGQGDENSS 402

Query: 429 CWVWVSQGWAGGSWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKT 488
           CWV VS  WAG ++G+M +PR+GQ+VIV ++ G+PD+P+ITGR Y  DQ+PP++LP + T
Sbjct: 403 CWVRVSSSWAGANFGTMHMPRVGQEVIVDFIGGEPDRPIITGRVYNSDQMPPWELPANAT 462

Query: 489 RMTIKSQTHKGDGFNE---LRFEDELGRQEVFIHAER--------DQNNVVKHNETTLIG 537
              I +++  G   N+   LRFED  G +++++HAER        D+ +      TTLI 
Sbjct: 463 ASGILTRSSSGGAANQANMLRFEDRTGSEQIWLHAERNLDVEVEADETHTTDGTRTTLIK 522

Query: 538 NDRSERVEHDEVVDI-GGNRSVKVGASKRETVALGKVESIGLGKSLAVGGALSVMV--GL 594
              S   +  E  DI  G R    G   R+ V  G  E++  G +  + G  + M+  GL
Sbjct: 523 GHESATYQDGETRDITAGARETITGGDTRD-VTGGFTETVSGGVNQTISGGKTRMLSGGL 581

Query: 595 EATEQVALDKRVQVGGQLRVDADE 618
           + T    ++  +  G    +D  E
Sbjct: 582 QDTITGGVNSAISGGYHGTIDGQE 605