Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  254 bits (650), Expect = 7e-72
 Identities = 192/663 (28%), Positives = 317/663 (47%), Gaps = 79/663 (11%)

Query: 6   FRFSFQALAGRTEFEVVSFKLDETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSAD 65
           F+ +        EF +  F   E L++ +  +L L+S +SD+    ++   A   +  ++
Sbjct: 17  FKLNILTQTANDEFLLEHFSGTEELSKLYEFDLALLSQQSDVKLKSLIGSQATVEIELSN 76

Query: 66  RPLRHVHGLVSAFSQGETGFCRTRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKR 125
              RH++G V  FS   +     RY AV+ P L     R + RIFQ+K+V  ++  +F  
Sbjct: 77  GSFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAG 136

Query: 126 QG-ITRFELKSSAQHQVREFCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRL 184
            G + ++E + S   +   +  Q  E+D +F+ RL   EG  Y FEH A  H +++TD  
Sbjct: 137 FGTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITD-- 194

Query: 185 LSFGLLSRGALKAEDDEALWLDEDDVGPDKVLYHASSGGDQARACLRRLRYCEQVRTARQ 244
                        +    L L E      ++ YH++S  + A + + + +   Q+++ + 
Sbjct: 195 -------------DSSTLLPLPEQP----QIRYHSASVTETADS-ITQWQSTRQLQSGQI 236

Query: 245 VQRDYTFTNPAYRQEHKAQTSGVTHQSLD-------YERFDYPGRYKRDAV--GKPFTET 295
             R + +  P            VT QSL+       +E +D+PG+Y   +   G+     
Sbjct: 237 AVRTFDYRQPR-------NFLPVTMQSLNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRN 289

Query: 296 RLTALRHDACLAEVQGDDVRLQTGLSFTLVGHPREDL----NVHWRVISLCHEGTQLTSL 351
           R+ AL         + +   ++ G +F L  H   D     N  + ++S+ H G+     
Sbjct: 290 RIEALELMGKTFYGESNCRAMKPGYTFELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMT 349

Query: 352 QEEAAGAEQGTRYVNDALLVQGMAEWRPA-PMAKPRIDGPHMATVVGPPGEEIYCDEWGR 410
            ++A        YVN  + V+    +RP     KP I+GP  A VVGPPGEEI+ DE GR
Sbjct: 350 GDQAG-------YVNRFVCVRKKIAYRPQLNTRKPLINGPQTAIVVGPPGEEIFTDELGR 402

Query: 411 VKVSFPWDRESKNNEFSSCWVWVSQGWAGGSWGSMAIPRIGQDVIVQYVNGDPDQPMITG 470
           VK+ F WDR+ + N+ SSCWV V+Q  A G +GS+ IPR+G +V+V +++G+PD+P+I G
Sbjct: 403 VKLQFHWDRQGQFNDQSSCWVRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMG 462

Query: 471 RTYCGDQLPPYDLPDHKTRMTIKSQTHKGDG--FNELRFEDELGRQEVFIHAERDQNNVV 528
             Y     PP+ LP +KT+    +++ KGDG   N  RFED+ G +++ +HAER+ +   
Sbjct: 463 SLYNSTNTPPWSLPANKTQSGFLTRSMKGDGGTANFFRFEDKAGAEQIIMHAERNMDT-- 520

Query: 529 KHNETTLIGNDRSERVEHDEVVDIGGNRSVKVGASKRETVALGKVESIGLGK-SLAVGGA 587
                          +E DE  D+G NRS+ VG +  ETV    V  +  G  +L V   
Sbjct: 521 --------------EIELDETHDVGNNRSITVGGTHTETVKKDTVVQVTEGSYTLQVD-- 564

Query: 588 LSVMVGLEATEQVALDKRVQVGGQLRVDADEDVSITSHHGHVHIDSRTSLTLSCGGAFIK 647
            +  + + A + + L    QVG        E + I    G V + + T  T    GA ++
Sbjct: 565 -NQFIQVAAKQHIIL----QVGDSSITLTPEGIEI---KGKVIVTTSTD-TTQITGAAVR 615

Query: 648 LSD 650
           ++D
Sbjct: 616 IND 618