Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 722 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

 Score =  904 bits (2337), Expect = 0.0
 Identities = 439/633 (69%), Positives = 513/633 (81%), Gaps = 10/633 (1%)

Query: 3   QSDFRFSFQALAGRTEFEVVSFKLDETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLY 62
           QSD R+SF+AL G+  FEVVSF+L E ++ PF L L+L+S+E+DIDFGH+LDKP LFT+ 
Sbjct: 4   QSDLRYSFEALVGKAAFEVVSFELREGISAPFELELKLISFENDIDFGHLLDKPVLFTIL 63

Query: 63  SADRPLRHVHGLVSAFSQGETGFCRTRYHAVVEPQLARARLRSNWRIFQQKTVPQILELM 122
             +RP+R+VHGLVS+FSQGE+GF RT YHA+VEPQLARARLRSNWRIFQ KTVPQILELM
Sbjct: 64  DGERPVRYVHGLVSSFSQGESGFYRTYYHALVEPQLARARLRSNWRIFQHKTVPQILELM 123

Query: 123 FKRQGITRFELKSSAQHQVREFCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTD 182
            KRQGI ++EL++S  HQVREFCVQAGETDL FI RLAAEEGFVYRF H  + H LI+TD
Sbjct: 124 LKRQGIDQYELRASMDHQVREFCVQAGETDLAFIARLAAEEGFVYRFAHSEKLHKLIITD 183

Query: 183 RLLSFGLLSRGALKAE-DDEALWLDEDDVGPDKVLYHASSGGDQARACLRRLRYCEQVRT 241
           RL S GL+S GA+KA+ +DE    D++ VGPD VLY A+SGGDQA  CLRRLRY EQVRT
Sbjct: 184 RLQSLGLISHGAIKADHEDEGFGDDDEPVGPDSVLYQANSGGDQAIPCLRRLRYSEQVRT 243

Query: 242 ARQVQRDYTFTNPAYRQEHKAQTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALR 301
           ARQVQRD+TFT+PAYRQEH+A    + HQS DYE FDYPGRYKRDAVGKPFTE R+TALR
Sbjct: 244 ARQVQRDHTFTHPAYRQEHRAAGPFLEHQSKDYEYFDYPGRYKRDAVGKPFTENRITALR 303

Query: 302 HDACLAEVQGDDVRLQTGLSFTLVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQG 361
           HD  +AEVQGDDVRLQ GLSFTL  HPREDLNVHWRV ++ HEG+Q TSLQEEAAGA+QG
Sbjct: 304 HDVRIAEVQGDDVRLQPGLSFTLTDHPREDLNVHWRVSTVHHEGSQPTSLQEEAAGADQG 363

Query: 362 TRYVNDALLVQGMAEWRPAPMAKPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRES 421
           TRY   A+LV G  EWRPAP+ KPR+DGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRES
Sbjct: 364 TRYEQKAVLVPGRTEWRPAPLPKPRVDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRES 423

Query: 422 KNNEFSSCWVWVSQGWAGGSWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPY 481
           +NNEFSSCW+ VSQGWAGGSWGSMAIPRIGQDVI+ YVNGDPDQPMITGRTYCG+QLPPY
Sbjct: 424 QNNEFSSCWLRVSQGWAGGSWGSMAIPRIGQDVIIHYVNGDPDQPMITGRTYCGNQLPPY 483

Query: 482 DLPDHKTRMTIKSQTHKGDGFNELRFEDELGRQEVFIHAERDQNNVVKHNETTLIGNDRS 541
           DLP HKTRMTIKSQTHKGDGFNELRFEDELG++EVFIHA+RDQNNVVKH+ETT +GNDR 
Sbjct: 484 DLPRHKTRMTIKSQTHKGDGFNELRFEDELGQEEVFIHAQRDQNNVVKHDETTQVGNDRK 543

Query: 542 ERVEHDEVVDIGGNRSVKVGASKRETVALGKVESIGLGKSLAVGGALSVMVGLEATEQVA 601
           E+V++DE + IG +R+  VG  +R T+       IG   ++ +       +G    +Q+A
Sbjct: 544 EQVDNDESILIGHDRTETVGNDERITIGQDAALDIGRNHTIRIAKDRVENIGNHRHDQIA 603

Query: 602 LDKRVQVGGQLRVDADEDVSITSHHGHVHIDSR 634
            +   ++GG      +         GH  +++R
Sbjct: 604 ANHHTRIGGNFEQRVE---------GHAELEAR 627