Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 846 a.a., Rhs element Vgr protein from Enterobacter asburiae PDN3

 Score =  260 bits (664), Expect = 2e-73
 Identities = 187/614 (30%), Positives = 297/614 (48%), Gaps = 35/614 (5%)

Query: 28  ETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADR-PLRHVHGLVSAFSQGETGFC 86
           E +++ F L L ++  ++ ID   +L +P   T+ + +    R+V+G ++  +       
Sbjct: 23  EAMSESFALTLTVLGTDARIDRSKLLGQPVTVTIPTQNLLTSRYVNGKITRVAVSAVELT 82

Query: 87  RTRY---HAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGITRFELKSSAQHQVRE 143
            TRY      VEP L   +   N RIFQ +TVPQI++ +     +   E K +  ++V +
Sbjct: 83  GTRYAVYQLTVEPDLWPMKRDRNLRIFQGQTVPQIVKTLLGEHQVN-VEDKLTGSYRVWD 141

Query: 144 FCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFGLLSRGALKAEDDEAL 203
           +CVQ  E+ LDFI RL   EG  Y F H A +HTL++TD        S            
Sbjct: 142 YCVQYQESSLDFISRLMELEGIAYHFSHEADKHTLVLTDAATQHQPFS------------ 189

Query: 204 WLDEDDVGPDKVLYHAS-SGGDQARACLRRLRYCEQVRTARQVQRDYTFTNPAYRQEHKA 262
                  G + + YH + SGG      + +    + V        DY F  P      +A
Sbjct: 190 -------GYEVIPYHQTPSGGSTDEEGISQWALEDSVTPGIYSLDDYDFRKPN-AWLFQA 241

Query: 263 QTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALRHDACLAEVQGDDVRLQTGLSF 322
           Q +  + +    + +D+PGR+     G+ +   R    + +    +       +  G +F
Sbjct: 242 QQNPASPKPGSIDVYDWPGRFVDKGHGEFYARIRQERWQVEHQQIQATATAAGIAPGHTF 301

Query: 323 TLVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQGTRYVNDALLVQGMAEWRPAPM 382
           TL   P    N  + V +  +   +        A  E  T +  D  ++     +RPA  
Sbjct: 302 TLTNAPFFSDNGEYLVTAAGYHFEE-----NRYASGEGETIHRTDFTVIPSAVVYRPAQT 356

Query: 383 -AKPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESKNNEFSSCWVWVSQGWAGGS 441
            A PR  GP  A VVGP GE I+ D++GRVKV F WDR +K ++ SSCWV VS  WAG  
Sbjct: 357 TAWPRTYGPQTAKVVGPNGESIWTDKYGRVKVKFHWDRLAKGDDTSSCWVRVSSAWAGQG 416

Query: 442 WGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKTRMTIKSQTHKG-- 499
           +G + IPR+G +V+V ++NGDPD+P+ITGR Y    +PP+ LP   T+M   S++  G  
Sbjct: 417 YGGVQIPRVGDEVVVDFINGDPDRPIITGRVYNDASMPPWALPAAATQMGFMSRSKGGSV 476

Query: 500 DGFNELRFEDELGRQEVFIHAERDQNNVVKHNETTLIGNDRSERVEHDEVVDIGGNRSVK 559
           D  N LRFED+ G ++V+I AER+ +  VK++ET  +G  RS  V+ +E+  +  N++  
Sbjct: 477 DNANALRFEDKAGAEQVWIQAERNMDTSVKNDETHSVGGARSHYVKKNELHRVEANQTQA 536

Query: 560 VGASKRETVALGKVESIGLGKSLAVGGALSVMVGLEATEQVALDKRVQVGGQLRVDADED 619
           V          GK+++      +A G  L ++ G  A E  A  K   +G +     + D
Sbjct: 537 VKGGTEILTGKGKLDASVEQYVIASGTKLRLVSGESAIELNANGKINLIGKEFNFFVEGD 596

Query: 620 VSITSHHGHVHIDS 633
             IT+  G +H+++
Sbjct: 597 GYITT-GGKLHLNT 609